RNA id: TCONS_00015426


Basic Information

Item Value
RNA id TCONS_00015426
length 116
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_007904
representative True

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 27175726 ~ 27175841 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tcatacagccatatcaccctgcagcccaagactggttacttactgaagctaagcagggctgagcctggttagtaacgggatggtagaccacatgggaaaaccagGTTGCTGCTGAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000174932

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00016404 lncRNA downstream 379013 26776218 ~ 26796713 (-) True XLOC_007902
TCONS_00016403 lncRNA downstream 379240 26776218 ~ 26796486 (-) False XLOC_007902
TCONS_00016402 lncRNA downstream 379386 26776218 ~ 26796340 (-) False XLOC_007902
TCONS_00016401 lncRNA downstream 379389 26776218 ~ 26796337 (-) False XLOC_007902
TCONS_00016400 lncRNA downstream 379389 26776218 ~ 26796337 (-) False XLOC_007902
TCONS_00016405 lncRNA upstream 146378 27322219 ~ 27334804 (-) False XLOC_007905
TCONS_00015428 lncRNA upstream 146378 27322219 ~ 27339283 (-) False XLOC_007905
TCONS_00016406 lncRNA upstream 146378 27322219 ~ 27339439 (-) True XLOC_007905
TCONS_00016407 lncRNA upstream 522184 27698025 ~ 27714037 (-) True XLOC_007907
TCONS_00016408 lncRNA upstream 811622 27987463 ~ 28005263 (-) True XLOC_007908
TCONS_00015424 mRNA downstream 53872 26995114 ~ 27121854 (-) False XLOC_007903
TCONS_00015422 mRNA downstream 470897 26703331 ~ 26704829 (-) True XLOC_007900
TCONS_00015421 mRNA downstream 639222 26511041 ~ 26536504 (-) True XLOC_007898
TCONS_00015416 mRNA downstream 677401 26467120 ~ 26498325 (-) False XLOC_007897
TCONS_00015415 mRNA downstream 677401 26467120 ~ 26498325 (-) False XLOC_007897
TCONS_00015427 mRNA upstream 104864 27280705 ~ 27297123 (-) True XLOC_007903
TCONS_00015430 mRNA upstream 822915 27998756 ~ 28001986 (-) False XLOC_007909
TCONS_00015431 mRNA upstream 823964 27999805 ~ 28052474 (-) False XLOC_007909
TCONS_00015432 mRNA upstream 837785 28013626 ~ 28052551 (-) True XLOC_007909
TCONS_00015434 mRNA upstream 1250761 28426602 ~ 28432699 (-) False XLOC_007911
TCONS_00015386 other downstream 1576726 25595871 ~ 25599000 (-) True XLOC_007883
TCONS_00015379 other downstream 2016520 25159129 ~ 25159206 (-) True XLOC_007880
TCONS_00015363 other downstream 2217330 24958280 ~ 24958396 (-) True XLOC_007872
TCONS_00015361 other downstream 2612843 24562801 ~ 24562883 (-) True XLOC_007870
TCONS_00015355 other downstream 2784302 24316770 ~ 24391424 (-) False XLOC_007865
TCONS_00015429 other upstream 380645 27556486 ~ 27556622 (-) True XLOC_007906
TCONS_00015433 other upstream 952317 28128158 ~ 28128278 (-) True XLOC_007910
TCONS_00015446 other upstream 2177166 29353007 ~ 29353123 (-) True XLOC_007918
TCONS_00015467 other upstream 3262081 30437922 ~ 30452210 (-) False XLOC_007928
TCONS_00015524 other upstream 4150760 31326601 ~ 31326717 (-) True XLOC_007951

Expression Profile

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