RNA id: CI01000039_07412923_07415375.mRNA



Basic Information


Item Value
RNA id CI01000039_07412923_07415375.mRNA
length 754
RNA type mRNA
GC content 0.41
exon number 4
gene id CI01000039_07412923_07415375
representative True

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7412721 ~ 7415525 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGATATAGATGACAGGAAGAAAAAGGATGAAGAACAGAAAAGCTGACCAAAATAATAGAAGAAGAGAGGTGGGGTTAGGCAGTGCAAAATCACAATTCCCCAATAATAGTCTTTTGACTCTAAATACAAGCCTAATTCGAAAAAAAGTTCCTGAAAGTGCAGATGTGTCGTTATTATTAATGTGTACATGGTGAGGGACAAAATGAGAGATGAGTGCACAAGGTTTCGCTCCTGCAGCACAGATAAACCTGAACAGCAGCACAAGTCAAACACGTTCAGTTCAACTAATGGCAAAAGAGAGTCTGCAGTGACCGTCAAAGGGACACTGGAAGAGTTGCCGAGGGCAGAGGTTGTGACACTTCAGGCTGAAGGTCAGAGGCGGAGTGAGAGTAAAAAGCACGGCATCATGGGCGAGTGGACTATACTGGAGAGATTGCTGGAGGCTGCGGTACAGCAGCACTCTACTATGATCGGCAGAAGAACATTCATATCTAGTCAATTACATGTTACAACACAAGGATACATAAACAGACACTTTACTCACTCCAATGACAATTCATTGGGCATCCCATCTGGCTCGTCAACATCTTCTGTTATGTATTAACTTCATTGTTATATGAGGGTATTTATTTATTAAGTCTTGTACTTTTCCTACTCAGTAAATGCGTTAGCTTCTCATTAGATGTTTTTGGTGTTTTTCATTTAATGAAACTTCAGCCTGTAAAAGAGTACTGATTTCACTTCAAGTGATGTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206658 lncRNA upstream 10421 7400581 ~ 7402300 (+) True G181962
TU206715 lncRNA upstream 12324 7400166 ~ 7400397 (+) True G182014
TU206704 lncRNA upstream 28412 7383566 ~ 7384309 (+) True G182004
TU206698 lncRNA upstream 62516 7349972 ~ 7350205 (+) True G182000
TU206697 lncRNA upstream 65519 7346805 ~ 7347202 (+) True G181999
TU206775 lncRNA downstream 66113 7481638 ~ 7482002 (+) True G182067
TU206771 lncRNA downstream 69570 7485095 ~ 7485424 (+) True G182063
TU206762 lncRNA downstream 94067 7509592 ~ 7511146 (+) True G182054
TU206759 lncRNA downstream 99771 7515296 ~ 7515637 (+) True G182051
TU206756 lncRNA downstream 103501 7519026 ~ 7526562 (+) True G182048
CI01000039_07394034_07396192.mRNA mRNA upstream 16462 7392793 ~ 7396259 (+) True CI01000039_07394034_07396192
CI01000039_07362633_07380267.mRNA mRNA upstream 32222 7362232 ~ 7380499 (+) True CI01000039_07362633_07380267
CI01000039_07332093_07361302.mRNA mRNA upstream 51395 7329603 ~ 7361326 (+) True CI01000039_07332093_07361302
CI01000039_07324920_07329407.mRNA mRNA upstream 83249 7324681 ~ 7329472 (+) False CI01000039_07324920_07329407
CI01000039_07299805_07316808.mRNA mRNA upstream 94746 7299805 ~ 7317975 (+) True CI01000039_07299805_07316808
CI01000039_07425682_07427826.mRNA mRNA downstream 10157 7425682 ~ 7427957 (+) True CI01000039_07425682_07427826
CI01000039_07442137_07446489.mRNA mRNA downstream 26067 7441592 ~ 7447160 (+) True CI01000039_07442137_07446489
CI01000039_07460749_07461491.mRNA mRNA downstream 45072 7460597 ~ 7462025 (+) True CI01000039_07460749_07461491
CI01000039_07463037_07464915.mRNA mRNA downstream 47512 7463037 ~ 7465201 (+) True CI01000039_07463037_07464915
CI01000039_07469638_07472925.mRNA mRNA downstream 53398 7468923 ~ 7472996 (+) True CI01000039_07469638_07472925
TU206652 other upstream 88024 7320684 ~ 7323274 (+) True G181961
TU205651 other upstream 2564158 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204575 other upstream 3188064 4223579 ~ 4223779 (+) True G180162
TU206748 other downstream 480351 7895876 ~ 7895913 (+) True G182040

Expression Profile