RNA id: CI01000039_07658015_07658757.mRNA


Basic Information

Item Value
RNA id CI01000039_07658015_07658757.mRNA
length 1202
RNA type mRNA
GC content 0.47
exon number 2
gene id CI01000039_07658015_07658757
representative True

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7657540 ~ 7659052 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGAAAATGTCAATTTTTAATGTGTCTTATTAAAATCATTGGCTGCATTCATTGCTGCATTGGTTGGAAGCCTGCTGGCAACAAACCCTACAAGAGTTATGAAAACCTATACAGTAATAAAAGGCTTTGCAATTGTAACAGGGTTTTTTTTCTTAAGAGGTTTGTTTCAACTGGGCAGAGATGAACAGCACTCTAGTGCGCAATGATCCACAAAAGAGGATCTGTTTCTCATGTTAAAGACAAACTGCGGTATTCTAGCACACATCTGAAGTTAGTCGTGCATTGGAGTATTAAACATGCCTGAGCAAGAATTAAGAGCAGCAGAAGCGCTAGCGATCATGTTCCGTCTATCATCCAGCATCAGCGCTGCATCCTCCAGCAGCCCACCGGGCCCCCACCCACCACCACAACACAAGCGATCAAATCCAGGGCGCACGACACGCCAGGACAAAAGATTCTTCCACTGGCTGTTCTCTCGGCCCGCTACTTACATATATGCAGGCGAGAGTGGGGAGGACCTGGACGTTTTAAGGACGGGCACGGGAAATTTCCAGCTGACGGGCGAACCGCTTTTCCATTTCAACGGCATGTTTTTCCAGTCAGCACCTCTGAGATACAGCGCGAATGAGAATAGCCGTCAAGAGCGAGTCCATGAAGAGGCGACCAGCGCGGGCTTCCATCCCCGGCAGCCCTCACCGAGAGCAGGGAGGAGGAAGAGCAAAATATAAAGAGGATCAACCGCCGACACAGGCAGCTCTGTTTGAGGCAGTGCTTCTCTGCTTGAGGCAGCTCTGTCTGAATACCGCAGCGAAGGTTGCGGAAAACCGGGAGGAATGACACTTAAGCCTGAGCCGAGAGGTGAAAAGCAGGTGTGCCTGAGCCGAGCATCATCTCCTGAGAAAGAGAGAGGGGGATGATGATGGAGGGAGGAAAAAAAAAATAGGCACCGTCGCGTCCGGTCAGCGCAGGGAAGAGGCATGCGCGGTCGGTGCACTGGATGCTCAGCTATAGTGCCACCTTGTTTGAATGCAGGCTGACTATGGCAAGCCTTATTAACATTCATTTACTTAACTTCTATCGATTGTATGTTAATAGTACTTTAAAATAAATAAATAAATAACTAACTATAGTATCCCAATGAACCCTGTAATTTCTATTCAGTTAGTATCTAGTACTTATTCGTTACGTATGTTTTTCATTAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207983 lncRNA downstream 62182 7595124 ~ 7595358 (-) True G183154
TU207980 lncRNA downstream 161214 7496060 ~ 7496326 (-) True G183151
TU207979 lncRNA downstream 161529 7495765 ~ 7496011 (-) True G183150
TU207972 lncRNA downstream 172055 7485119 ~ 7485485 (-) True G183143
TU207971 lncRNA downstream 172732 7484577 ~ 7484808 (-) True G183142
TU208054 lncRNA upstream 75491 7734543 ~ 7734910 (-) True G183212
TU208061 lncRNA upstream 111377 7770429 ~ 7775182 (-) True G183214
TU208078 lncRNA upstream 117676 7776728 ~ 7777392 (-) True G183231
TU208079 lncRNA upstream 119279 7778331 ~ 7778642 (-) True G183232
TU208080 lncRNA upstream 121011 7780063 ~ 7780273 (-) True G183233
CI01000039_07619613_07632295.mRNA mRNA downstream 25245 7618880 ~ 7632295 (-) True CI01000039_07619613_07632295
CI01000039_07592640_07593317.mRNA mRNA downstream 62487 7592548 ~ 7595053 (-) True CI01000039_07592640_07593317
CI01000039_07523213_07573865.mRNA mRNA downstream 81389 7523197 ~ 7576151 (-) True CI01000039_07523213_07573865
CI01000039_07498583_07505779.mRNA mRNA downstream 150938 7498503 ~ 7506602 (-) True CI01000039_07498583_07505779
CI01000039_07450597_07454594.mRNA mRNA downstream 202910 7449808 ~ 7454630 (-) True CI01000039_07450597_07454594
CI01000039_07781930_07783389.mRNA mRNA upstream 122838 7781890 ~ 7783694 (-) True CI01000039_07781930_07783389
CI01000039_07908291_07909766.mRNA mRNA upstream 248852 7907904 ~ 7910468 (-) True CI01000039_07908291_07909766
CI01000039_07952703_07961286.mRNA mRNA upstream 293234 7952286 ~ 7962019 (-) True CI01000039_07952703_07961286
CI01000039_07987279_07996351.mRNA mRNA upstream 328160 7987212 ~ 7996921 (-) True CI01000039_07987279_07996351
CI01000039_08003424_08011297.mRNA mRNA upstream 344358 8003410 ~ 8012533 (-) False CI01000039_08003424_08011297
TU207766 other downstream 519773 7134107 ~ 7134198 (-) True G182956
TU207638 other downstream 1008964 6647527 ~ 6648576 (-) False CI01000039_06647926_06651530
TU207627 other downstream 1022340 6634547 ~ 6635200 (-) True G182827
TU207563 other downstream 1149107 6507955 ~ 6508433 (-) True G182771
TU207225 other downstream 2020940 5636247 ~ 5636600 (-) True G182470
TU208115 other upstream 313064 7972116 ~ 7975045 (-) True G183261

Expression Profile