RNA id: CI01000039_08083646_08085318.mRNA



Basic Information


Item Value
RNA id CI01000039_08083646_08085318.mRNA
length 1268
RNA type mRNA
GC content 0.36
exon number 2
gene id CI01000039_08083646_08085318
representative True

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 8083646 ~ 8086184 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGAGGAGGCTGCAGCAGCAAAACAAACTGAAAAACTGTTGGCCGAGGCATGTTTATATTGTCGGAGTAAATGCCAATCACTAGCGAAAACCACGTTAGCCAAACCCCGTAAGTCACATCACCAAAAACAGCAGGCTAAGAGGGAGATAACACACCCAGATAGCAAGAAAATGGCAGAAATAGAGATTATTCCAGCTGATGCTGCAGACTTGGGGAACTCACCCAGATTTACCCTGAAGATTGTGACTGAGCAGACACATGCAACAGAGCTTGTGGAGATGTTAACTCGTAGAGGTCGCTCTGTTGAGGTTTCAGATCGCCATAGTAACCCCTCTGTCTCTGCTGTTACAGAAGATGATGACAACAACCAAGATTACACTGATGCAATACAGAATATATAAATCTCTGTGTAGTTTAGGAATTTTTTAATCATAACGTTTAGTTTAGCTACTAGAATGAATTCAATTATAAATATAGAACTATGTAAACAAGTGAATTTGTTATTTTGTGTGCAACAAGAACATGGACTGAAAGACATATGAATCACATTTGTTTTTCAATTATTGGACACACGAGTTTACTCAAAGGGTCCAGCATTCCCATGAACCTACACAGGACAAGCTCTGGAGAAAGGATACTCAGTCTAAATGCTTCATACATATGTATTTAGTATCTGTAACTTGAACATGACAAAACGAGGCTGTAAAATGTACAATGTTACATTTTGTTGGAGGATTTAATTGGTTATCAATACACATACACATTCAAACAAATGTATTCAATTAGATTAAGGTTCAAAACTGACATTGATGAAGATCAGGAAAATACATTTAAAATATGAAACAATTCATCTGTGCAGAATTTAAACTGGAATTTTGTTAAGTCATTATTCTGACGTAGTACAGGGAAGCGCTGCACTGTCTATACAACGTAAACACCATAGGAGACTGATGGGAGAGACGAAATTGCTGAATGAAGTTATTTTTGTTTTGTTTTTGCACACAAAAAGTATTCTTGTCGCTTCATACCACTGTAGTCACGTTGACTATTTAATGTCTTTACTACTTTTCTGGATCTTAAATGTGGTAATTACGTTGCTTTCTGTGGGGGATAAAAAAAAAAAACTCTTGGATTTCATTAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTTTTATGGATGTGGAACAGCATGAGGGTGAGTAATTAATGACAGAAATTTCATTTTTGGGTGAACTAACCCTTTAAGTGAAATGTTGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206907 lncRNA upstream 6604 8076837 ~ 8077042 (+) True G182197
TU206905 lncRNA upstream 8547 8074680 ~ 8075099 (+) True G182195
TU206904 lncRNA upstream 9105 8074337 ~ 8074541 (+) True G182194
TU206893 lncRNA upstream 101652 7981444 ~ 7981994 (+) True G182185
TU206892 lncRNA upstream 102980 7980408 ~ 7980666 (+) True G182184
TU206913 lncRNA downstream 2648 8088832 ~ 8089206 (+) True G182203
TU206959 lncRNA downstream 200789 8286973 ~ 8291456 (+) True G182239
TU206962 lncRNA downstream 206387 8292571 ~ 8292915 (+) True G182242
TU206974 lncRNA downstream 229890 8316074 ~ 8316325 (+) True G182248
TU206976 lncRNA downstream 235648 8321832 ~ 8322058 (+) True G182250
CI01000039_08052093_08053571.mRNA mRNA upstream 29936 8051815 ~ 8053710 (+) True CI01000039_08052093_08053571
CI01000039_08044880_08049054.mRNA mRNA upstream 33618 8044880 ~ 8050028 (+) True CI01000039_08044880_08049054
CI01000039_08014352_08018949.mRNA mRNA upstream 64531 8013606 ~ 8019115 (+) True CI01000039_08014352_08018949
CI01000039_07972168_07974927.mRNA mRNA upstream 108624 7971946 ~ 7975022 (+) True CI01000039_07972168_07974927
CI01000039_07965528_07969798.mRNA mRNA upstream 113734 7965528 ~ 7969912 (+) True CI01000039_07965528_07969798
CI01000039_08113233_08115430.mRNA mRNA downstream 27049 8113233 ~ 8116142 (+) True CI01000039_08113233_08115430
CI01000039_08166944_08171773.mRNA mRNA downstream 80669 8166853 ~ 8171773 (+) True CI01000039_08166944_08171773
CI01000039_08200873_08207267.mRNA mRNA downstream 112950 8199134 ~ 8208124 (+) True CI01000039_08200873_08207267
CI01000039_08302787_08303257.mRNA mRNA downstream 216603 8302787 ~ 8303472 (+) True CI01000039_08302787_08303257
CI01000039_08323007_08331689.mRNA mRNA downstream 236823 8323007 ~ 8331754 (+) True CI01000039_08323007_08331689
TU206748 other upstream 184890 7895876 ~ 7895913 (+) True G182040
TU206652 other upstream 758949 7320684 ~ 7323274 (+) True G181961
TU205651 other upstream 3235083 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204574 other upstream 3858989 4223593 ~ 4223779 (+) True G180162
TU204572 other upstream 3859039 4223593 ~ 4223779 (+) False G180162

Expression Profile