RNA id: TCONS_00015524


Basic Information

Item Value
RNA id TCONS_00015524
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_007951
representative True

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 31326601 ~ 31326717 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgccacagccatatcaccctgcagcccaagagtggttactcactgaaggtaagcagggctgagtctggtcagtatctgtatgggagaccacatagaaaAACAAGTTTGCtgttagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000180999

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00015520 lncRNA downstream 267383 31013301 ~ 31059218 (-) True XLOC_007947
TCONS_00015512 lncRNA downstream 358435 30967444 ~ 30968166 (-) True XLOC_007945
TCONS_00015496 lncRNA downstream 441285 30884428 ~ 30885316 (-) True XLOC_007940
TCONS_00015493 lncRNA downstream 450052 30862941 ~ 30876549 (-) True XLOC_007939
TCONS_00015491 lncRNA downstream 460834 30855671 ~ 30865767 (-) False XLOC_007939
TCONS_00016412 lncRNA upstream 139889 31466606 ~ 31469280 (-) False XLOC_007952
TCONS_00016413 lncRNA upstream 139889 31466606 ~ 31469460 (-) False XLOC_007952
TCONS_00015535 lncRNA upstream 289160 31615877 ~ 31616734 (-) False XLOC_007956
TCONS_00015537 lncRNA upstream 306429 31633146 ~ 31635433 (-) True XLOC_007957
TCONS_00015552 lncRNA upstream 531701 31858418 ~ 31860637 (-) False XLOC_007959
TCONS_00015522 mRNA downstream 175453 31090151 ~ 31151148 (-) True XLOC_007949
TCONS_00015521 mRNA downstream 238771 31081862 ~ 31087830 (-) True XLOC_007948
TCONS_00015514 mRNA downstream 246418 30986754 ~ 31080183 (-) False XLOC_007947
TCONS_00015518 mRNA downstream 266519 30993310 ~ 31060082 (-) False XLOC_007947
TCONS_00015519 mRNA downstream 266519 30993328 ~ 31060082 (-) False XLOC_007947
TCONS_00015529 mRNA upstream 150256 31476973 ~ 31489410 (-) False XLOC_007953
TCONS_00015530 mRNA upstream 153357 31480074 ~ 31488100 (-) True XLOC_007953
TCONS_00015532 mRNA upstream 224042 31550759 ~ 31562795 (-) False XLOC_007955
TCONS_00015534 mRNA upstream 288860 31615577 ~ 31618243 (-) False XLOC_007956
TCONS_00015536 mRNA upstream 289359 31616076 ~ 31619408 (-) True XLOC_007956
TCONS_00015467 other downstream 874391 30437922 ~ 30452210 (-) False XLOC_007928
TCONS_00015446 other downstream 1973478 29353007 ~ 29353123 (-) True XLOC_007918
TCONS_00015433 other downstream 3198323 28128158 ~ 28128278 (-) True XLOC_007910
TCONS_00015429 other downstream 3769979 27556486 ~ 27556622 (-) True XLOC_007906
TCONS_00015426 other downstream 4150760 27175726 ~ 27175841 (-) True XLOC_007904
TCONS_00015525 other upstream 139954 31466671 ~ 31466782 (-) False XLOC_007952
TCONS_00015526 other upstream 140309 31467026 ~ 31467130 (-) False XLOC_007952
TCONS_00015527 other upstream 140450 31467167 ~ 31467260 (-) False XLOC_007952
TCONS_00015528 other upstream 140659 31467376 ~ 31467460 (-) True XLOC_007952
TCONS_00015531 other upstream 195213 31521930 ~ 31522007 (-) True XLOC_007954