RNA id: TU206425


Basic Information

Item Value
RNA id TU206425
length 201
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G181781
representative True

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6531360 ~ 6531560 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCGCTGCGTTTTTTTCCGTCCCGGTTGAGGCAGCTGCACTACAAACATCCAGTTCTGAGGAATTGGATGTGGTTAGTGTGGCAACAGGAGATACTGAAGACTCGTCACTTCAGTCTCCTGCAAGTGAGGAGCTTGTGGGGGTTTTGACTCGCGCTGTGGCCAAATTAAAGTGGAGGTATAATGCTATTTCATGTATTCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206413 lncRNA upstream 22857 6507892 ~ 6508503 (+) True G181770
TU206411 lncRNA upstream 25813 6505204 ~ 6505547 (+) True G181768
TU206405 lncRNA upstream 62790 6468342 ~ 6468570 (+) True G181762
TU206398 lncRNA upstream 95871 6435281 ~ 6435489 (+) True G181755
TU206397 lncRNA upstream 101946 6429140 ~ 6429414 (+) True G181754
TU206426 lncRNA downstream 298 6531858 ~ 6532130 (+) True G181782
TU206430 lncRNA downstream 3120 6534680 ~ 6534922 (+) True G181786
TU206431 lncRNA downstream 3505 6535065 ~ 6535439 (+) True G181787
TU206432 lncRNA downstream 3886 6535446 ~ 6535787 (+) True G181788
TU206450 lncRNA downstream 137754 6669314 ~ 6669649 (+) True G181802
CI01000039_06517676_06525898.mRNA mRNA upstream 5413 6517526 ~ 6525947 (+) True CI01000039_06517676_06525898
CI01000039_06472455_06491979.mRNA mRNA upstream 38898 6472455 ~ 6492462 (+) True CI01000039_06472455_06491979
CI01000039_06436994_06439467.mRNA mRNA upstream 91756 6436994 ~ 6439604 (+) True CI01000039_06436994_06439467
CI01000039_06313617_06317466.mRNA mRNA upstream 212615 6313433 ~ 6318745 (+) True CI01000039_06313617_06317466
CI01000039_06288292_06297288.mRNA mRNA upstream 233914 6288162 ~ 6297446 (+) True CI01000039_06288292_06297288
CI01000039_06584621_06616401.mRNA mRNA downstream 53061 6584621 ~ 6616401 (+) True CI01000039_06584621_06616401
CI01000039_06677303_06686187.mRNA mRNA downstream 145743 6677303 ~ 6686864 (+) True CI01000039_06677303_06686187
CI01000039_06729386_06739661.mRNA mRNA downstream 197826 6729386 ~ 6740315 (+) True CI01000039_06729386_06739661
CI01000039_06744598_06746185.mRNA mRNA downstream 213038 6744598 ~ 6746534 (+) True CI01000039_06744598_06746185
CI01000039_06808952_06821780.mRNA mRNA downstream 277392 6808952 ~ 6821971 (+) True CI01000039_06808952_06821780
TU205651 other upstream 1682797 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204575 other upstream 2306703 4223579 ~ 4223779 (+) True G180162
TU204574 other upstream 2306703 4223593 ~ 4223779 (+) True G180162
TU204573 other upstream 2306753 4223579 ~ 4223779 (+) False G180162
TU206652 other downstream 789124 7320684 ~ 7323274 (+) True G181961
TU206748 other downstream 1364316 7895876 ~ 7895913 (+) True G182040

Expression Profile