RNA id: TU206450


Basic Information

Item Value
RNA id TU206450
length 336
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G181802
representative True

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6669314 ~ 6669649 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAAAACCACATGTTGGTGTGGGAAAGCGATAGCTTGTTTTGTGCATACAAATTATTTTTTCATGAAAAAAAAAAAACCTTTAATAAATTTTGAAGTACCCAATAAATTTGTGTATTTCAGAACACTGTAACATCTAAGTTTAGTTTCAGTTTTGTTATGAAGGACGTTTAGATTGTTAGTTCCTGTTTTCTGTTTTCCCTCTGTCTAGTCTGTTCCCTTAGTTACTGATTATGTTCACTTGCCACTTGTTTAGCCTTCAATTATCTCCTGTGTATTTAAGCCCTGTGATTGGTTCTGTTCAGTGTCCAGTATTGTTTTCACCTAGGTTGTGCTGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206432 lncRNA upstream 133527 6535446 ~ 6535787 (+) True G181788
TU206431 lncRNA upstream 133875 6535065 ~ 6535439 (+) True G181787
TU206430 lncRNA upstream 134392 6534680 ~ 6534922 (+) True G181786
TU206426 lncRNA upstream 137184 6531858 ~ 6532130 (+) True G181782
TU206425 lncRNA upstream 137754 6531360 ~ 6531560 (+) True G181781
TU206508 lncRNA downstream 245356 6915005 ~ 6915340 (+) True G181855
TU206562 lncRNA downstream 275853 6945502 ~ 6946386 (+) True G181888
TU206571 lncRNA downstream 297848 6967497 ~ 6967792 (+) True G181897
TU206543 lncRNA downstream 402550 7072199 ~ 7073021 (+) False G181870
TU206544 lncRNA downstream 403141 7072790 ~ 7073021 (+) True G181870
CI01000039_06584621_06616401.mRNA mRNA upstream 52913 6584621 ~ 6616401 (+) True CI01000039_06584621_06616401
CI01000039_06517676_06525898.mRNA mRNA upstream 143367 6517526 ~ 6525947 (+) True CI01000039_06517676_06525898
CI01000039_06472455_06491979.mRNA mRNA upstream 176852 6472455 ~ 6492462 (+) True CI01000039_06472455_06491979
CI01000039_06436994_06439467.mRNA mRNA upstream 229710 6436994 ~ 6439604 (+) True CI01000039_06436994_06439467
CI01000039_06313617_06317466.mRNA mRNA upstream 350569 6313433 ~ 6318745 (+) True CI01000039_06313617_06317466
CI01000039_06677303_06686187.mRNA mRNA downstream 7654 6677303 ~ 6686864 (+) True CI01000039_06677303_06686187
CI01000039_06729386_06739661.mRNA mRNA downstream 59737 6729386 ~ 6740315 (+) True CI01000039_06729386_06739661
CI01000039_06744598_06746185.mRNA mRNA downstream 74949 6744598 ~ 6746534 (+) True CI01000039_06744598_06746185
CI01000039_06808952_06821780.mRNA mRNA downstream 139303 6808952 ~ 6821971 (+) True CI01000039_06808952_06821780
CI01000039_06870209_06877994.mRNA mRNA downstream 199701 6869350 ~ 6878040 (+) True CI01000039_06870209_06877994
TU205651 other upstream 1820751 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204575 other upstream 2444657 4223579 ~ 4223779 (+) True G180162
TU204574 other upstream 2444657 4223593 ~ 4223779 (+) True G180162
TU204573 other upstream 2444707 4223579 ~ 4223779 (+) False G180162
TU206652 other downstream 651035 7320684 ~ 7323274 (+) True G181961
TU206748 other downstream 1226227 7895876 ~ 7895913 (+) True G182040

Expression Profile