RNA id: TU206544



Basic Information


Item Value
RNA id TU206544
length 232
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G181870
representative True

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7072199 ~ 7073021 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTTCAGCAATTTAACTAAACACACTAACACAGTCGACGGAGGCGTCGTGTTTTGTTTATGCTTGTATAGCCAGTTTCACACAGCGCGCGGCACTCATTCTGTGTTGCCATGGTCACTCATTATAAGCTTTTTGGGCTCGTCTCATAAAGCAAACGGGTTTATGGAGTTATTAAAGTGAGCAGACATGAATCGCGATTTTCAGCATAAAGCATTTGGATAGGCTTGTGCTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206571 lncRNA upstream 104998 6967497 ~ 6967792 (+) True G181897
TU206562 lncRNA upstream 126404 6945502 ~ 6946386 (+) True G181888
TU206508 lncRNA upstream 157450 6915005 ~ 6915340 (+) True G181855
TU206450 lncRNA upstream 403141 6669314 ~ 6669649 (+) True G181802
TU206432 lncRNA upstream 537003 6535446 ~ 6535787 (+) True G181788
TU206689 lncRNA downstream 265750 7338771 ~ 7339059 (+) True G181991
TU206690 lncRNA downstream 266069 7339090 ~ 7339315 (+) True G181992
TU206693 lncRNA downstream 267965 7340986 ~ 7341316 (+) True G181995
TU206695 lncRNA downstream 272240 7345261 ~ 7345498 (+) True G181997
TU206696 lncRNA downstream 273484 7346505 ~ 7346767 (+) True G181998
CI01000039_07064587_07070336.mRNA mRNA upstream 2085 7061877 ~ 7070705 (+) True CI01000039_07064587_07070336
CI01000039_06870209_06877994.mRNA mRNA upstream 194750 6869350 ~ 6878040 (+) True CI01000039_06870209_06877994
CI01000039_06808952_06821780.mRNA mRNA upstream 250819 6808952 ~ 6821971 (+) True CI01000039_06808952_06821780
CI01000039_06744598_06746185.mRNA mRNA upstream 326256 6744598 ~ 6746534 (+) True CI01000039_06744598_06746185
CI01000039_06729386_06739661.mRNA mRNA upstream 332475 6729386 ~ 6740315 (+) True CI01000039_06729386_06739661
CI01000039_07077165_07115931.mRNA mRNA downstream 2578 7075599 ~ 7116364 (+) True CI01000039_07077165_07115931
CI01000039_07121218_07123412.mRNA mRNA downstream 48093 7121114 ~ 7123499 (+) True CI01000039_07121218_07123412
CI01000039_07128589_07132310.mRNA mRNA downstream 54570 7127591 ~ 7132374 (+) True CI01000039_07128589_07132310
CI01000039_07168326_07178388.mRNA mRNA downstream 95305 7168326 ~ 7178479 (+) True CI01000039_07168326_07178388
CI01000039_07180306_07197393.mRNA mRNA downstream 107285 7180306 ~ 7197533 (+) True CI01000039_07180306_07197393
TU205651 other upstream 2224227 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204575 other upstream 2848133 4223579 ~ 4223779 (+) True G180162
TU204574 other upstream 2848133 4223593 ~ 4223779 (+) True G180162
TU204573 other upstream 2848183 4223579 ~ 4223779 (+) False G180162
TU206652 other downstream 247663 7320684 ~ 7323274 (+) True G181961
TU206748 other downstream 822855 7895876 ~ 7895913 (+) True G182040

Expression Profile