RNA id: TU207852



Basic Information


Item Value
RNA id TU207852
length 280
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G183041
representative True

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7075280 ~ 7075559 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAGCTACACTGCTGCTGAATCGATTCAGCGCCACACACACATGCACGCGGTCTAGCTGTCTCACACTCAGGCGATGTCCTCTGACAATTCACGATAGAACTATAAACGCAGACATTACTAAATAATGTAATAAAAGCATCATTACAATAGCTTAACCCACCCAGAAAGTCTGGAACAAGTTCTAAACACACGAACGCATACGCTTTTACGCGCGCGCACGCGAACGCGCAACAACAACATTCGCCAAAACACACGCAGGCGCACATAAACAAACCAAAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU207850 lncRNA downstream 2261 7072261 ~ 7073019 (-) False G183039
TU207849 lncRNA downstream 2261 7072779 ~ 7073019 (-) True G183039
TU207845 lncRNA downstream 18822 7056245 ~ 7056458 (-) True G183035
TU207838 lncRNA downstream 29349 7045645 ~ 7045931 (-) True G183028
TU207836 lncRNA downstream 32936 7042133 ~ 7042344 (-) True G183026
TU207853 lncRNA upstream 159 7075718 ~ 7075952 (-) True G183042
TU207854 lncRNA upstream 935 7076494 ~ 7076715 (-) True G183043
TU207873 lncRNA upstream 46581 7122140 ~ 7124041 (-) True G183061
TU207880 lncRNA upstream 131231 7206790 ~ 7207004 (-) True G183068
TU207881 lncRNA upstream 132530 7208089 ~ 7208300 (-) True G183069
CI01000039_07006878_07015672.mRNA mRNA downstream 59007 7006309 ~ 7016273 (-) True CI01000039_07006878_07015672
CI01000039_06990836_06994541.mRNA mRNA downstream 80365 6990086 ~ 6994915 (-) True CI01000039_06990836_06994541
CI01000039_06833672_06856433.mRNA mRNA downstream 218550 6833590 ~ 6856730 (-) True CI01000039_06833672_06856433
CI01000039_06702521_06707733.mRNA mRNA downstream 367547 6701606 ~ 6707733 (-) True CI01000039_06702521_06707733
CI01000039_06647926_06651530.mRNA mRNA downstream 421831 6646710 ~ 6653449 (-) False CI01000039_06647926_06651530
CI01000039_07134422_07137732.mRNA mRNA upstream 58863 7134422 ~ 7137732 (-) False CI01000039_07134422_07137732
CI01000039_07141149_07162368.mRNA mRNA upstream 65404 7140963 ~ 7162368 (-) True CI01000039_07141149_07162368
CI01000039_07165860_07166458.mRNA mRNA upstream 89224 7164783 ~ 7166458 (-) True CI01000039_07165860_07166458
CI01000039_07320926_07323244.mRNA mRNA upstream 245158 7320717 ~ 7324653 (-) True CI01000039_07320926_07323244
CI01000039_07385848_07389331.mRNA mRNA upstream 309270 7384829 ~ 7390490 (-) True CI01000039_07385848_07389331
TU207638 other downstream 426704 6647527 ~ 6648576 (-) False CI01000039_06647926_06651530
TU207627 other downstream 440080 6634547 ~ 6635200 (-) True G182827
TU207563 other downstream 566847 6507955 ~ 6508433 (-) True G182771
TU207224 other downstream 1438516 5636058 ~ 5636764 (-) False G182470
TU207766 other upstream 58548 7134107 ~ 7134198 (-) True G182956
TU208115 other upstream 896557 7972116 ~ 7975045 (-) True G183261

Expression Profile