RNA id: TU206693


Basic Information

Item Value
RNA id TU206693
length 331
lncRNA type intronic
GC content 0.37
exon number 1
gene id G181995
representative True

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7340986 ~ 7341316 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAATCTGTTTAAATGTCTGATGTATTATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCCGTGACTGACAGTGCTAGTCAAAGCATTTGTCAGTTGCGTCTTGTTCCGTGTTCACAACAATTCAGTCTTTTCAATGTAAAAGTCTTTGCCACTGACTGACAAACTCATAAAGACAGTCTTTGCCGCCATCTAATGGCGTAATAATGTAACTTCTGTTGTTGTTCACAGTCGGGGACTATTTTTTCCAGTGGAAGGAAGGCTTTTAGTGAAAGTTTACTTCATGAAAGTCGCATTGATACATATTTTTGGCTTTAATATTTGTATGGTAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU206690 lncRNA upstream 1671 7339090 ~ 7339315 (+) True G181992
TU206689 lncRNA upstream 1927 7338771 ~ 7339059 (+) True G181991
TU206543 lncRNA upstream 267965 7072199 ~ 7073021 (+) False G181870
TU206544 lncRNA upstream 267965 7072790 ~ 7073021 (+) True G181870
TU206571 lncRNA upstream 373194 6967497 ~ 6967792 (+) True G181897
TU206695 lncRNA downstream 3945 7345261 ~ 7345498 (+) True G181997
TU206696 lncRNA downstream 5189 7346505 ~ 7346767 (+) True G181998
TU206697 lncRNA downstream 5489 7346805 ~ 7347202 (+) True G181999
TU206698 lncRNA downstream 8656 7349972 ~ 7350205 (+) True G182000
TU206704 lncRNA downstream 42250 7383566 ~ 7384309 (+) True G182004
CI01000039_07324920_07329407.mRNA mRNA upstream 11514 7324681 ~ 7329472 (+) False CI01000039_07324920_07329407
CI01000039_07299805_07316808.mRNA mRNA upstream 23011 7299805 ~ 7317975 (+) True CI01000039_07299805_07316808
CI01000039_07268272_07278840.mRNA mRNA upstream 62087 7268169 ~ 7278899 (+) True CI01000039_07268272_07278840
CI01000039_07259359_07263181.mRNA mRNA upstream 77358 7259230 ~ 7263628 (+) True CI01000039_07259359_07263181
CI01000039_07236216_07240207.mRNA mRNA upstream 99772 7235981 ~ 7241214 (+) True CI01000039_07236216_07240207
CI01000039_07362633_07380267.mRNA mRNA downstream 20916 7362232 ~ 7380499 (+) True CI01000039_07362633_07380267
CI01000039_07394034_07396192.mRNA mRNA downstream 51477 7392793 ~ 7396259 (+) True CI01000039_07394034_07396192
CI01000039_07412923_07415375.mRNA mRNA downstream 71405 7412721 ~ 7415525 (+) True CI01000039_07412923_07415375
CI01000039_07425682_07427826.mRNA mRNA downstream 84366 7425682 ~ 7427957 (+) True CI01000039_07425682_07427826
CI01000039_07442137_07446489.mRNA mRNA downstream 100276 7441592 ~ 7447160 (+) True CI01000039_07442137_07446489
TU206652 other upstream 16289 7320684 ~ 7323274 (+) True G181961
TU205651 other upstream 2492423 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204575 other upstream 3116329 4223579 ~ 4223779 (+) True G180162
TU206748 other downstream 554560 7895876 ~ 7895913 (+) True G182040

Expression Profile