RNA id: TU206762



Basic Information


Item Value
RNA id TU206762
length 1555
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G182054
representative True

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7509592 ~ 7511146 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTGTTTTTAAATGGAAAGAGTTAAAGTACAATTAATTTCAAGTATAAAAAATTAATACCTAAATAGGAACATAGTAGTATACTGAAAGGTGGTCTCAGTAGAATTTCAAATACACTGTTTGGAAGTTAGTTGGGCCAACACCAACAACAAACGTCTAACCAATCTGTCTAGGAGACAGAACGAGCAAGAGGGAGATTTGAAAATAATAAGAAAAAAAACTGCAGAACGAGAGATGGGACACAACACAAAAAAAGCTCAAAAGAATATCACTGGAATGAAGGTTTATTTCTGGGCAAGCGCTTTAGGACCGCGTTTATATTAGAAAAGCTTTCCAGCGCTGGAGAGAGCTAAGTGGGAAGGCCTGAAAACAGACTTGGAGGCTGCTTTGATTCCTTCTTATGTGAGTAACACTGGGTTTAGATTGTCTGGAGCTGCTGTGCTGTTGGCGACTAACAACGAACGCTTTGTATTTACTCTTGTGTACTGTGCGTTCATTCTTTGTGCTTCCTTGTTGTTCGTTCATCAACTGCGCTTTATTTTTCGTGAAGCATTTTGTTGCGCGTGTCAGCTGTGATAAACAGACATCCACTCTCACTGTGTGTGTAACAGTGGTCAGATAGTGAGAGTTTTGCAGTTAAACAACTGCACACTGACAACCGTTAGAGAATGTGGTGTTTAGTGTCATTGATCGTGCATTTGCCTCGCGTGCCAGCGGCGATCGGGCCGGGGTTCGGGACTGACTCGGAGCAGGAGGTTGGGATTGGAGTGTGAGTTTTGGAGGCGAAGCAATGAAGAGAGGGGTGGGTTTTTTTGGGTTGATTTCAAATATCAGCGTTGTTAAAAATCTACTTACCGCACCTTTAAAGTGCAAAAATAATATATAAATAGTAAACTATAATGGTCACTTAAAGAAAACTTACAGGTATACTTGCAGTATAAAACTACTAGTAGTTGAGAGTATACTTCAAAGTGTACTTTCATAAAATAAATGTGCAACAAGTATTTGACAAGTTAACAGTAAACCTATAAGTTCACTTGTAGCACAGTTGCAGTACAAAAAAAAACAAAAAAACAACTTAGTTGTAAACTAGTTGTGTACTCAAAGTTTACTACTGTTACACTTAAAAGTATACTGTTACCCACTAAAAAGTGGGCCAATTTAGTCCAAGCAGTATTGAAACTGTAAGGGAGGTTAGATTTTAGGAAATGTCTGCAGCAGCGGCGTCTATAAGAGTCCAGTAACACAATATCATATGACCACTTTAATCGCCCACTGAAGCAGGTAGAGCAAAGATAAGCAGAGAGGACATCATGTGAATATGGGAGGGTAGTGATGTTACATATGACACTGAAGCTCATAGGCGTGGGAAGTGGGACAGTAAATTTTTCACAGGACAGTTAATGCAACGCAAATTTTTGCTCAGTTACGTTTATTCATTTTTATCATTTAATAATTTGTTTGTAATAAACACTTTAAATGGGCTATAAAAATGTTGTTGTTGTGTTTTTTTTTTTAAGAACAACTAAGATCTAATAAAAACGCTTTACAGGCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU206771 lncRNA upstream 24168 7485095 ~ 7485424 (+) True G182063
TU206775 lncRNA upstream 27590 7481638 ~ 7482002 (+) True G182067
TU206658 lncRNA upstream 107292 7400581 ~ 7402300 (+) True G181962
TU206715 lncRNA upstream 109195 7400166 ~ 7400397 (+) True G182014
TU206704 lncRNA upstream 125283 7383566 ~ 7384309 (+) True G182004
TU206759 lncRNA downstream 4150 7515296 ~ 7515637 (+) True G182051
TU206756 lncRNA downstream 7880 7519026 ~ 7526562 (+) True G182048
TU206799 lncRNA downstream 30165 7541311 ~ 7572931 (+) True G182091
TU206849 lncRNA downstream 267482 7778628 ~ 7778831 (+) True G182141
TU206763 lncRNA downstream 408579 7919725 ~ 7922591 (+) True G182055
CI01000039_07474049_07478088.mRNA mRNA upstream 30986 7473751 ~ 7478606 (+) True CI01000039_07474049_07478088
CI01000039_07469638_07472925.mRNA mRNA upstream 36596 7468923 ~ 7472996 (+) True CI01000039_07469638_07472925
CI01000039_07463037_07464915.mRNA mRNA upstream 44391 7463037 ~ 7465201 (+) True CI01000039_07463037_07464915
CI01000039_07460749_07461491.mRNA mRNA upstream 47567 7460597 ~ 7462025 (+) True CI01000039_07460749_07461491
CI01000039_07442137_07446489.mRNA mRNA upstream 62432 7441592 ~ 7447160 (+) True CI01000039_07442137_07446489
CI01000039_07512584_07512877.mRNA mRNA downstream 1333 7512479 ~ 7512984 (+) True CI01000039_07512584_07512877
CI01000039_07604862_07616660.mRNA mRNA downstream 93716 7604862 ~ 7616660 (+) True CI01000039_07604862_07616660
CI01000039_07673393_07690390.mRNA mRNA downstream 162247 7673393 ~ 7691259 (+) True CI01000039_07673393_07690390
CI01000039_07702176_07705973.mRNA mRNA downstream 191030 7702176 ~ 7706101 (+) True CI01000039_07702176_07705973
CI01000039_07723565_07724142.mRNA mRNA downstream 212419 7723565 ~ 7724756 (+) True CI01000039_07723565_07724142
TU206652 other upstream 184895 7320684 ~ 7323274 (+) True G181961
TU205651 other upstream 2661029 4844182 ~ 4848563 (+) True CI01000039_04829464_04847182
TU204575 other upstream 3284935 4223579 ~ 4223779 (+) True G180162
TU206748 other downstream 384730 7895876 ~ 7895913 (+) True G182040

Expression Profile