RNA id: TU208191



Basic Information


Item Value
RNA id TU208191
length 259
lncRNA type intronic
GC content 0.36
exon number 1
gene id G183334
representative True

Chromosome Information


Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 8047338 ~ 8047596 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TCAAAATATTCACAAAAATCTAACCTTTAATTAAAGTCAAATTAAGTTTTAAATAGTTAAAAAACATTTTTTTCTTTCTGAAAAATATGTATTGCAGCCTCCCTTTGCCATGATAACAGCTCTGGATCTTCTCCTATAATGCGTTGTAATGTTGATGAATATATGGCAAGAGATCTGAAACCAATCCTCCACACAGAATCTCTCCAGATCCTTCAGATCCAGAGGTCCAGGGTTTGGTCAGGGGACTGCTATGTCCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU208190 lncRNA downstream 350 8046731 ~ 8046988 (-) True G183333
TU208130 lncRNA downstream 2973 8044031 ~ 8044365 (-) True G183276
TU208186 lncRNA downstream 38288 8008824 ~ 8009050 (-) True G183329
TU208104 lncRNA downstream 42854 8002478 ~ 8004484 (-) True G183250
TU208185 lncRNA downstream 70290 7975563 ~ 7977048 (-) True G183328
TU208123 lncRNA upstream 1195 8048791 ~ 8050021 (-) True G183269
TU208089 lncRNA upstream 4087 8051683 ~ 8053788 (-) False G183241
TU208092 lncRNA upstream 4087 8051683 ~ 8053788 (-) False G183241
TU208093 lncRNA upstream 4087 8051683 ~ 8070531 (-) True G183241
TU208198 lncRNA upstream 27523 8075119 ~ 8075355 (-) True G183341
CI01000039_08038068_08041738.mRNA mRNA downstream 5600 8036919 ~ 8041738 (-) True CI01000039_08038068_08041738
CI01000039_08022279_08026193.mRNA mRNA downstream 21145 8021899 ~ 8026193 (-) True CI01000039_08022279_08026193
CI01000039_08003424_08011297.mRNA mRNA downstream 34805 8003410 ~ 8012533 (-) False CI01000039_08003424_08011297
CI01000039_07987279_07996351.mRNA mRNA downstream 50417 7987212 ~ 7996921 (-) True CI01000039_07987279_07996351
CI01000039_07952703_07961286.mRNA mRNA downstream 85319 7952286 ~ 7962019 (-) True CI01000039_07952703_07961286
CI01000039_08062731_08064494.mRNA mRNA upstream 14997 8062593 ~ 8064494 (-) True CI01000039_08062731_08064494
CI01000039_08065500_08069266.mRNA mRNA upstream 17904 8065500 ~ 8069690 (-) True CI01000039_08065500_08069266
CI01000039_08102220_08109961.mRNA mRNA upstream 54382 8101978 ~ 8109961 (-) True CI01000039_08102220_08109961
CI01000039_08127858_08129554.mRNA mRNA upstream 80017 8127613 ~ 8129689 (-) True CI01000039_08127858_08129554
CI01000039_08131887_08142840.mRNA mRNA upstream 83244 8130840 ~ 8145112 (-) True CI01000039_08131887_08142840
TU208115 other downstream 72293 7972116 ~ 7975045 (-) True G183261
TU207766 other downstream 909571 7134107 ~ 7134198 (-) True G182956
TU207638 other downstream 1398762 6647527 ~ 6648576 (-) False CI01000039_06647926_06651530
TU207627 other downstream 1412138 6634547 ~ 6635200 (-) True G182827
TU207563 other downstream 1538905 6507955 ~ 6508433 (-) True G182771

Expression Profile