RNA id: TU208626



Basic Information


Item Value
RNA id TU208626
length 203
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G183726
representative True

Chromosome Information


Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 480455 ~ 480657 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTAACTATGACTTTTCCCTCAATAAACTCCTAATTTACTGCTTATTAATAGTTAGTAAGGTAGTTGTTAAGTTTAGGTATTGGGTAGGATTAAGAATGTAGAATAAGATCATGCAGAATAAGGCATTAATATGTGCTTAATAAGTACTAATGAATAGCCGATATTCTAGTAATATGCATGCTAATAAGCAACTAGTTAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU208625 lncRNA downstream 79 480155 ~ 480376 (-) True G183725
TU208622 lncRNA downstream 4204 475918 ~ 476251 (-) True G183722
TU208611 lncRNA downstream 25661 454478 ~ 454794 (-) True G183711
TU208584 lncRNA downstream 51564 428675 ~ 428891 (-) True G183684
TU208583 lncRNA downstream 53930 426310 ~ 426525 (-) True CI01000040_00413047_00426023
TU208803 lncRNA upstream 83997 564654 ~ 564886 (-) True G183879
TU208804 lncRNA upstream 84250 564907 ~ 565146 (-) True G183880
TU208805 lncRNA upstream 84529 565186 ~ 565408 (-) True G183881
TU208821 lncRNA upstream 154322 634979 ~ 635312 (-) True G183897
TU208831 lncRNA upstream 166657 647314 ~ 647585 (-) True G183906
CI01000040_00413047_00426023.mRNA mRNA downstream 53391 413005 ~ 427064 (-) False CI01000040_00413047_00426023
CI01000040_00153873_00173202.mRNA mRNA downstream 307253 153873 ~ 173202 (-) True CI01000040_00153873_00173202
CI01000040_00081665_00111856.mRNA mRNA downstream 368261 80979 ~ 112194 (-) True CI01000040_00081665_00111856
CI01000040_00002763_00060396.mRNA mRNA downstream 420059 2763 ~ 60396 (-) True CI01000040_00002763_00060396
CI01000040_00569008_00598590.mRNA mRNA upstream 88103 568760 ~ 598590 (-) True CI01000040_00569008_00598590
CI01000040_00623449_00625433.mRNA mRNA upstream 142766 623423 ~ 626036 (-) True CI01000040_00623449_00625433
CI01000040_00626750_00628543.mRNA mRNA upstream 145824 626481 ~ 628559 (-) False CI01000040_00626750_00628543
CI01000040_00701332_00746419.mRNA mRNA upstream 220176 700833 ~ 746964 (-) True CI01000040_00701332_00746419
CI01000040_00760116_00779888.mRNA mRNA upstream 279459 760116 ~ 780882 (-) True CI01000040_00760116_00779888
TU208367 other downstream 429729 46627 ~ 50726 (-) True G183474
TU208782 other upstream 145175 625832 ~ 628694 (-) True CI01000040_00626750_00628543
TU208899 other upstream 352483 833140 ~ 833541 (-) True G183972
TU210608 other upstream 2114589 2595246 ~ 2596376 (-) False CI01000040_02595281_02596387
TU210615 other upstream 2114722 2595379 ~ 2596424 (-) True CI01000040_02595281_02596387
TU210786 other upstream 2511531 2992188 ~ 2992683 (-) True G185593

Expression Profile