Item | Value |
---|---|
RNA id | TU208742 |
length | 224 |
lncRNA type | intronic |
GC content | 0.44 |
exon number | 1 |
gene id | G183825 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000040 |
NCBI id | null |
chromosome length | 6879596 |
location | 742054 ~ 742277 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU208738 | lncRNA | upstream | 8863 | 729051 ~ 733191 (+) | True | G183822 |
TU208690 | lncRNA | upstream | 40449 | 700312 ~ 701605 (+) | True | G183775 |
TU208696 | lncRNA | upstream | 41880 | 699712 ~ 700174 (+) | True | G183780 |
TU208694 | lncRNA | upstream | 44288 | 697294 ~ 697766 (+) | True | G183778 |
TU208729 | lncRNA | upstream | 46611 | 694887 ~ 695443 (+) | True | G183813 |
TU208744 | lncRNA | downstream | 5717 | 747994 ~ 748295 (+) | True | G183827 |
TU208745 | lncRNA | downstream | 8498 | 750775 ~ 751079 (+) | True | G183828 |
TU208746 | lncRNA | downstream | 8921 | 751198 ~ 751473 (+) | True | G183829 |
TU208747 | lncRNA | downstream | 9293 | 751570 ~ 751928 (+) | True | G183830 |
TU208748 | lncRNA | downstream | 10408 | 752685 ~ 753250 (+) | True | G183831 |
CI01000040_00643738_00689792.mRNA | mRNA | upstream | 52136 | 643738 ~ 689918 (+) | True | CI01000040_00643738_00689792 |
CI01000040_00554753_00561571.mRNA | mRNA | upstream | 179061 | 554753 ~ 562993 (+) | True | CI01000040_00554753_00561571 |
CI01000040_00512880_00513451.mRNA | mRNA | upstream | 228457 | 512880 ~ 513597 (+) | True | CI01000040_00512880_00513451 |
CI01000040_00366809_00384965.mRNA | mRNA | upstream | 356795 | 366709 ~ 385259 (+) | True | CI01000040_00366809_00384965 |
CI01000040_00347516_00350540.mRNA | mRNA | upstream | 391453 | 347516 ~ 350601 (+) | True | CI01000040_00347516_00350540 |
CI01000040_00839831_00841736.mRNA | mRNA | downstream | 97554 | 839831 ~ 841736 (+) | True | CI01000040_00839831_00841736 |
CI01000040_00849226_00851895.mRNA | mRNA | downstream | 106949 | 849226 ~ 851915 (+) | True | CI01000040_00849226_00851895 |
CI01000040_00863147_00874526.mRNA | mRNA | downstream | 120870 | 863147 ~ 874546 (+) | True | CI01000040_00863147_00874526 |
CI01000040_00879146_00889251.mRNA | mRNA | downstream | 136869 | 879146 ~ 889483 (+) | True | CI01000040_00879146_00889251 |
CI01000040_00895179_00895620.mRNA | mRNA | downstream | 152902 | 895179 ~ 895649 (+) | False | CI01000040_00895179_00895620 |
TU208290 | other | upstream | 465199 | 197712 ~ 276855 (+) | True | G183418 |
TU208294 | other | upstream | 577132 | 157543 ~ 164922 (+) | True | G183420 |
TU208230 | other | upstream | 681657 | 53691 ~ 60397 (+) | True | G183366 |
TU208979 | other | downstream | 231836 | 974113 ~ 974246 (+) | True | G184034 |
TU208940 | other | downstream | 488015 | 1230292 ~ 1236489 (+) | True | G184003 |
TU210451 | other | downstream | 2591301 | 3333578 ~ 3333983 (+) | True | G185296 |
TU211111 | other | downstream | 2996710 | 3738987 ~ 3739281 (+) | True | G185884 |
TU211185 | other | downstream | 3231488 | 3973765 ~ 3974123 (+) | True | G185947 |