RNA id: TU211036


Basic Information

Item Value
RNA id TU211036
length 220
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G185814
representative True

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3556072 ~ 3556361 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAGGGCCCGTATTAAAGAGTAGGACTTTTCTAAGAGTAGGAGACTTTTATAAAGAAGCTAAAAACAACTTTTAGTAAAGTATAAGACTGATTCTTAAGTGCTGACTGAAGTCGCACTTAAGTGTTGTGAAGTAAAGACTACAATGATGTCAACTCAAAATGGCCGCCCTCAACCTCTGAATCAGCCAATAGCGAGTCTGCAAGGGTGAAGTCACAGCAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210979 lncRNA upstream 1964 3495271 ~ 3554108 (+) True G185764
TU211019 lncRNA upstream 44818 3508542 ~ 3511254 (+) True G185799
TU210928 lncRNA upstream 144924 3410775 ~ 3411148 (+) True G185722
TU210911 lncRNA upstream 177721 3377805 ~ 3378351 (+) False G185707
TU210912 lncRNA upstream 177721 3377851 ~ 3378351 (+) True G185707
TU211043 lncRNA downstream 5177 3561538 ~ 3640757 (+) False G185818
TU211044 lncRNA downstream 45733 3602094 ~ 3640757 (+) True G185818
TU211098 lncRNA downstream 154883 3711244 ~ 3711551 (+) True G185871
TU211104 lncRNA downstream 169624 3725985 ~ 3726235 (+) True G185877
TU211007 lncRNA downstream 245858 3802219 ~ 3803713 (+) True G185790
CI01000040_03297317_03298657.mRNA mRNA upstream 257176 3296455 ~ 3298896 (+) True CI01000040_03297317_03298657
CI01000040_03271519_03276006.mRNA mRNA upstream 280032 3271063 ~ 3276040 (+) True CI01000040_03271519_03276006
CI01000040_03212701_03215022.mRNA mRNA upstream 340904 3212701 ~ 3215168 (+) True CI01000040_03212701_03215022
CI01000040_03168337_03198400.mRNA mRNA upstream 357672 3168337 ~ 3198400 (+) True CI01000040_03168337_03198400
CI01000040_02975088_02975548.mRNA mRNA upstream 580126 2975088 ~ 2975946 (+) True CI01000040_02975088_02975548
CI01000040_03761247_03762668.mRNA mRNA downstream 204800 3761161 ~ 3762674 (+) True CI01000040_03761247_03762668
CI01000040_03789687_03800746.mRNA mRNA downstream 232720 3789081 ~ 3800746 (+) True CI01000040_03789687_03800746
CI01000040_03939728_03943493.mRNA mRNA downstream 381947 3938308 ~ 3943624 (+) True CI01000040_03939728_03943493
CI01000040_04047210_04060876.mRNA mRNA downstream 490849 4047210 ~ 4061675 (+) True CI01000040_04047210_04060876
CI01000040_04063098_04068134.mRNA mRNA downstream 506586 4062947 ~ 4068198 (+) True CI01000040_04063098_04068134
TU210451 other upstream 222089 3333578 ~ 3333983 (+) True G185296
TU208940 other upstream 2319583 1230292 ~ 1236489 (+) True G184003
TU208979 other upstream 2577909 974113 ~ 974246 (+) True G184034
TU208290 other upstream 3279217 197712 ~ 276855 (+) True G183418
TU208294 other upstream 3391150 157543 ~ 164922 (+) True G183420
TU211111 other downstream 182626 3738987 ~ 3739281 (+) True G185884
TU211185 other downstream 417404 3973765 ~ 3974123 (+) True G185947
TU212953 other downstream 2412684 5969045 ~ 5971732 (+) False G187510
TU212954 other downstream 2412684 5969045 ~ 5971732 (+) False G187510
TU212956 other downstream 2412684 5969045 ~ 5971732 (+) True G187510

Expression Profile