RNA id: TU216244


Basic Information

Item Value
RNA id TU216244
length 228
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G190369
representative True

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 2250261 ~ 2250488 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGGATTGCAGAAGAATAAGATGCAGAAGAAAGTTCAACACTTTACTCCAGCAAAACAAAAATAAAAAATAAATAAATGAAACATAAATGTGATGTTAAAGTGTTTTTTTCTTATTATTAGTATGGTTGAATTAGATCATCGAAGGTCAGCAGCAAAGACAAGGGTTCACAAAGTGAGATTAAATGCATAAAGTATATTTGTATTAAAATGTAATTATTGCATGTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU216095 lncRNA upstream 4881 2195188 ~ 2245380 (+) False G190235
TU216097 lncRNA upstream 4881 2208114 ~ 2245380 (+) True G190235
TU216239 lncRNA upstream 30699 2219134 ~ 2219562 (+) True G190364
TU216224 lncRNA upstream 54542 2191181 ~ 2195719 (+) True G190349
TU216214 lncRNA upstream 89104 2160932 ~ 2161157 (+) True G190339
TU216151 lncRNA downstream 15848 2266336 ~ 2267529 (+) True G190280
TU216100 lncRNA downstream 40632 2291120 ~ 2294501 (+) True G190237
TU216090 lncRNA downstream 103520 2354008 ~ 2355653 (+) True G190233
TU216263 lncRNA downstream 107859 2358347 ~ 2358652 (+) True G190385
TU216269 lncRNA downstream 199453 2449941 ~ 2450276 (+) True G190391
CI01000043_02220697_02231568.mRNA mRNA upstream 17549 2220697 ~ 2232712 (+) True CI01000043_02220697_02231568
CI01000043_02129173_02152417.mRNA mRNA upstream 97594 2129173 ~ 2152667 (+) True CI01000043_02129173_02152417
CI01000043_02033302_02075904.mRNA mRNA upstream 174113 2033302 ~ 2076148 (+) True CI01000043_02033302_02075904
CI01000043_01992845_02000632.mRNA mRNA upstream 248644 1992845 ~ 2001617 (+) True CI01000043_01992845_02000632
CI01000043_01970557_01977108.mRNA mRNA upstream 272572 1970557 ~ 1977689 (+) True CI01000043_01970557_01977108
CI01000043_02278110_02287253.mRNA mRNA downstream 26133 2276621 ~ 2288074 (+) True CI01000043_02278110_02287253
CI01000043_02335484_02351163.mRNA mRNA downstream 84996 2335484 ~ 2351384 (+) True CI01000043_02335484_02351163
CI01000043_02375390_02413694.mRNA mRNA downstream 124902 2375390 ~ 2413793 (+) True CI01000043_02375390_02413694
CI01000043_02464522_02485377.mRNA mRNA downstream 214034 2464522 ~ 2486310 (+) True CI01000043_02464522_02485377
CI01000043_02504537_02519367.mRNA mRNA downstream 251435 2501923 ~ 2520632 (+) True CI01000043_02504537_02519367
TU216107 other upstream 557782 1683556 ~ 1692479 (+) True G190241
TU216143 other downstream 191374 2441862 ~ 2443710 (+) True G190272
TU217666 other downstream 1652745 3903233 ~ 3909966 (+) True G191670
TU217639 other downstream 2057460 4307948 ~ 4350614 (+) True G191644
TU218497 other downstream 2742525 4993013 ~ 4993356 (+) True G192454
TU218527 other downstream 2863398 5113886 ~ 5118448 (+) True G192484

Expression Profile