RNA id: TU218786


Basic Information

Item Value
RNA id TU218786
length 227
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G192703
representative True

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4675268 ~ 4675494 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCATTTTAACAGTATTTTTTAACAAATTCATTAAAAATACACTTTCAAAAGCTGAAGTGATTTCCTTGTTTAATTATTAGTTAAAGTATAACTCAGTATTTTAACTAATTGCTAGTGGAATAATTCAACAAAACATACTGATTAACCAGTATAATAATCGATGATTAGTCGATTAATCGTTCCAATAATCGGTAGATTAATTGATTATCAAAATAATCGTTTGTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218785 lncRNA downstream 1086 4673887 ~ 4674182 (-) True G192702
TU218774 lncRNA downstream 35149 4639820 ~ 4640119 (-) True G192691
TU218771 lncRNA downstream 39800 4635222 ~ 4635468 (-) True G192688
TU218767 lncRNA downstream 42725 4632300 ~ 4632543 (-) True G192684
TU218754 lncRNA downstream 57237 4617697 ~ 4618031 (-) True G192671
TU218787 lncRNA upstream 39 4675533 ~ 4675842 (-) True G192704
TU218790 lncRNA upstream 11499 4686993 ~ 4687297 (-) True G192707
TU218795 lncRNA upstream 18093 4693587 ~ 4693797 (-) True G192712
TU218745 lncRNA upstream 141262 4816756 ~ 4818207 (-) True G192663
TU218849 lncRNA upstream 190497 4865991 ~ 4866385 (-) True G192764
CI01000043_04486893_04491014.mRNA mRNA downstream 183280 4486601 ~ 4491988 (-) True CI01000043_04486893_04491014
CI01000043_04297368_04337304.mRNA mRNA downstream 337964 4296824 ~ 4337304 (-) True CI01000043_04297368_04337304
CI01000043_04292518_04294909.mRNA mRNA downstream 380359 4292183 ~ 4294909 (-) True CI01000043_04292518_04294909
CI01000043_04185319_04204509.mRNA mRNA downstream 470227 4185108 ~ 4205041 (-) True CI01000043_04185319_04204509
CI01000043_04168896_04172758.mRNA mRNA downstream 502510 4168871 ~ 4172758 (-) True CI01000043_04168896_04172758
CI01000043_04701996_04719324.mRNA mRNA upstream 26502 4701996 ~ 4719324 (-) True CI01000043_04701996_04719324
CI01000043_04725324_04728884.mRNA mRNA upstream 49575 4725069 ~ 4728884 (-) True CI01000043_04725324_04728884
CI01000043_04738890_04742485.mRNA mRNA upstream 63396 4738890 ~ 4743454 (-) True CI01000043_04738890_04742485
CI01000043_04821316_04858515.mRNA mRNA upstream 145580 4821074 ~ 4859482 (-) False CI01000043_04821316_04858515
CI01000043_04920619_04925317.mRNA mRNA upstream 244900 4920394 ~ 4925317 (-) True CI01000043_04920619_04925317
TU218131 other downstream 342542 4331911 ~ 4332726 (-) True G192109
TU217252 other downstream 1625404 3048372 ~ 3049864 (-) True G191296
TU216373 other downstream 2425788 2244688 ~ 2249480 (-) True CI01000043_02245322_02249390
TU215688 other downstream 3792100 825737 ~ 883168 (-) False G189881
TU219083 other upstream 781003 5456497 ~ 5458414 (-) True G192980
TU219049 other upstream 918187 5593681 ~ 5618440 (-) True G192947
TU219459 other upstream 1580078 6255572 ~ 6256279 (-) True G193313
TU220206 other upstream 1887846 6563340 ~ 6566039 (-) True G193922
TU220402 other upstream 2755392 7478375 ~ 7478742 (-) True CI01000043_07464177_07486461

Expression Profile