RNA id: TU218795



Basic Information


Item Value
RNA id TU218795
length 211
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G192712
representative True

Chromosome Information


Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 4693587 ~ 4693797 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACTTTGACACAAATACAAACAAAAATACTTACCATTCATAAATGTCCTTTAAAAGCCGTGCTTGCAGAGGTTCTGCTTGACCCTCTTCATTACTGCTATCTGGGTCTGATTCGGGCTCAAATTGATACGGCAATATTGACGCCATTATTTACATTTCCACCGAAGCACATGCGACTTATGCCCGTAATGGTAAGGGGCGTGGCGTTTCCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU218790 lncRNA downstream 6290 4686993 ~ 4687297 (-) True G192707
TU218787 lncRNA downstream 17745 4675533 ~ 4675842 (-) True G192704
TU218786 lncRNA downstream 18093 4675268 ~ 4675494 (-) True G192703
TU218785 lncRNA downstream 19405 4673887 ~ 4674182 (-) True G192702
TU218774 lncRNA downstream 53468 4639820 ~ 4640119 (-) True G192691
TU218745 lncRNA upstream 122959 4816756 ~ 4818207 (-) True G192663
TU218849 lncRNA upstream 172194 4865991 ~ 4866385 (-) True G192764
TU218857 lncRNA upstream 186883 4880680 ~ 4880920 (-) True G192772
TU218861 lncRNA upstream 192381 4886178 ~ 4886419 (-) True G192776
TU218870 lncRNA upstream 258951 4952748 ~ 4992973 (-) True G192785
CI01000043_04486893_04491014.mRNA mRNA downstream 201599 4486601 ~ 4491988 (-) True CI01000043_04486893_04491014
CI01000043_04297368_04337304.mRNA mRNA downstream 356283 4296824 ~ 4337304 (-) True CI01000043_04297368_04337304
CI01000043_04292518_04294909.mRNA mRNA downstream 398678 4292183 ~ 4294909 (-) True CI01000043_04292518_04294909
CI01000043_04185319_04204509.mRNA mRNA downstream 488546 4185108 ~ 4205041 (-) True CI01000043_04185319_04204509
CI01000043_04168896_04172758.mRNA mRNA downstream 520829 4168871 ~ 4172758 (-) True CI01000043_04168896_04172758
CI01000043_04701996_04719324.mRNA mRNA upstream 8199 4701996 ~ 4719324 (-) True CI01000043_04701996_04719324
CI01000043_04725324_04728884.mRNA mRNA upstream 31272 4725069 ~ 4728884 (-) True CI01000043_04725324_04728884
CI01000043_04738890_04742485.mRNA mRNA upstream 45093 4738890 ~ 4743454 (-) True CI01000043_04738890_04742485
CI01000043_04821316_04858515.mRNA mRNA upstream 127277 4821074 ~ 4859482 (-) False CI01000043_04821316_04858515
CI01000043_04920619_04925317.mRNA mRNA upstream 226597 4920394 ~ 4925317 (-) True CI01000043_04920619_04925317
TU218131 other downstream 360861 4331911 ~ 4332726 (-) True G192109
TU217252 other downstream 1643723 3048372 ~ 3049864 (-) True G191296
TU216373 other downstream 2444107 2244688 ~ 2249480 (-) True CI01000043_02245322_02249390
TU215688 other downstream 3810419 825737 ~ 883168 (-) False G189881
TU219083 other upstream 762700 5456497 ~ 5458414 (-) True G192980
TU219049 other upstream 899884 5593681 ~ 5618440 (-) True G192947
TU219459 other upstream 1561775 6255572 ~ 6256279 (-) True G193313
TU220206 other upstream 1869543 6563340 ~ 6566039 (-) True G193922
TU220402 other upstream 2737089 7478375 ~ 7478742 (-) True CI01000043_07464177_07486461

Expression Profile