RNA id: TU220523


Basic Information

Item Value
RNA id TU220523
length 379
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G194212
representative True

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 7673771 ~ 7684699 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTTAATTGCAAAAGACTAAGAATTAGGGTGAAGAAATAGCTGCTACTAACAATGAGCAAGACGGACCTTTTGGGGTAGGAGGAGGAATAAAAATGAACTCCCAAAACTTACTGCGGGATTCTGGAAGATAAAGGGCCAGATTTACTAAACAGGGCAAATAAGTGTGAGAAAATATATGATCAAAATATCTGCTTGCATAACAATTACACACACACTGATGTTTCAGTGATGGAGGGATATTCTGTCACTTTACTTAAGTAACTGATGATTTGATACTGTGGATGTTTGTTGCTTGTGTGATATTGCCTAGTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU220487 lncRNA downstream 112231 7558487 ~ 7561540 (-) True G194183
TU220414 lncRNA downstream 113095 7557975 ~ 7560676 (-) True G194111
TU220423 lncRNA downstream 113458 7513863 ~ 7560313 (-) True G194120
TU220401 lncRNA downstream 174798 7496788 ~ 7498973 (-) True G194100
TU220403 lncRNA downstream 175138 7494997 ~ 7498633 (-) False G194100
CI01000043_07642034_07648935.mRNA mRNA downstream 24418 7641825 ~ 7649353 (-) True CI01000043_07642034_07648935
CI01000043_07464177_07486461.mRNA mRNA downstream 186627 7463755 ~ 7487144 (-) False CI01000043_07464177_07486461
CI01000043_07424769_07438909.mRNA mRNA downstream 234851 7424769 ~ 7438920 (-) False CI01000043_07424769_07438909
CI01000043_07418072_07421953.mRNA mRNA downstream 249881 7417406 ~ 7423890 (-) True CI01000043_07418072_07421953
CI01000043_07363226_07372771.mRNA mRNA downstream 301000 7363226 ~ 7372771 (-) True CI01000043_07363226_07372771
CI01000043_07697097_07700330.mRNA mRNA upstream 11897 7696596 ~ 7701211 (-) True CI01000043_07697097_07700330
TU220402 other downstream 195029 7478375 ~ 7478742 (-) True CI01000043_07464177_07486461
TU220206 other downstream 1107732 6563340 ~ 6566039 (-) True G193922
TU219459 other downstream 1417492 6255572 ~ 6256279 (-) True G193313
TU219049 other downstream 2055331 5593681 ~ 5618440 (-) True G192947
TU219083 other downstream 2215357 5456497 ~ 5458414 (-) True G192980

Expression Profile