Item | Value |
---|---|
RNA id | CI01000046_01047300_01066367.mRNA |
length | 2370 |
RNA type | mRNA |
GC content | 0.51 |
exon number | 16 |
gene id | CI01000046_01047300_01066367 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000046 |
NCBI id | null |
chromosome length | 7063170 |
location | 1047209 ~ 1066367 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
id | name | namespace |
---|---|---|
GO:0046872 | metal ion binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU221843 | lncRNA | downstream | 113601 | 873108 ~ 933608 (-) | True | G195307 |
TU221870 | lncRNA | downstream | 143433 | 903376 ~ 903776 (-) | True | G195333 |
TU221815 | lncRNA | downstream | 206517 | 840427 ~ 840692 (-) | True | G195282 |
TU221813 | lncRNA | downstream | 207506 | 839364 ~ 839703 (-) | True | G195280 |
TU221592 | lncRNA | downstream | 266916 | 774434 ~ 780293 (-) | False | CI01000046_00777923_00780186 |
TU221950 | lncRNA | upstream | 18477 | 1084844 ~ 1085092 (-) | True | G195403 |
TU221961 | lncRNA | upstream | 53357 | 1119724 ~ 1119925 (-) | True | G195412 |
TU221970 | lncRNA | upstream | 76718 | 1143085 ~ 1143475 (-) | True | G195421 |
TU221971 | lncRNA | upstream | 77147 | 1143514 ~ 1143752 (-) | True | G195422 |
TU221975 | lncRNA | upstream | 85007 | 1151374 ~ 1151694 (-) | True | G195426 |
CI01000046_00790248_00814884.mRNA | mRNA | downstream | 232325 | 790183 ~ 814884 (-) | True | CI01000046_00790248_00814884 |
CI01000046_00777923_00780186.mRNA | mRNA | downstream | 267023 | 777672 ~ 780186 (-) | False | CI01000046_00777923_00780186 |
CI01000046_00749734_00763064.mRNA | mRNA | downstream | 283728 | 749684 ~ 763481 (-) | True | CI01000046_00749734_00763064 |
CI01000046_00702360_00703954.mRNA | mRNA | downstream | 343255 | 701939 ~ 703954 (-) | True | CI01000046_00702360_00703954 |
CI01000046_00690567_00697727.mRNA | mRNA | downstream | 347337 | 690140 ~ 699872 (-) | True | CI01000046_00690567_00697727 |
CI01000046_01074910_01076076.mRNA | mRNA | upstream | 8431 | 1074798 ~ 1076424 (-) | True | CI01000046_01074910_01076076 |
CI01000046_01098117_01099160.mRNA | mRNA | upstream | 30891 | 1097258 ~ 1099160 (-) | True | CI01000046_01098117_01099160 |
CI01000046_01167146_01194022.mRNA | mRNA | upstream | 100661 | 1167028 ~ 1194022 (-) | True | CI01000046_01167146_01194022 |
CI01000046_01236373_01241067.mRNA | mRNA | upstream | 169625 | 1235992 ~ 1241067 (-) | True | CI01000046_01236373_01241067 |
CI01000046_01421301_01451701.mRNA | mRNA | upstream | 354145 | 1420512 ~ 1451931 (-) | True | CI01000046_01421301_01451701 |
TU221589 | other | downstream | 266916 | 777733 ~ 780293 (-) | True | CI01000046_00777923_00780186 |
TU221617 | other | downstream | 371081 | 670736 ~ 676128 (-) | True | G195098 |
TU221615 | other | downstream | 620883 | 407423 ~ 426326 (-) | False | G195097 |
TU221614 | other | downstream | 620883 | 407470 ~ 426326 (-) | True | G195097 |
TU221564 | other | downstream | 981298 | 63699 ~ 65911 (-) | True | G195066 |
TU223112 | other | upstream | 1101899 | 2168266 ~ 2168644 (-) | True | G196463 |
TU224633 | other | upstream | 1799892 | 2866259 ~ 2867794 (-) | True | CI01000046_02866255_02867695 |
TU225032 | other | upstream | 2691256 | 3757623 ~ 3800101 (-) | False | G198265 |
TU225919 | other | upstream | 5030992 | 6097359 ~ 6097674 (-) | True | G199054 |
TU225878 | other | upstream | 5297811 | 6364178 ~ 6375406 (-) | True | G199014 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
zebrafish (Danio rerio) | TCONS_00050533 | True | 7406 | mRNA | 0.39 | 15 | NC_007114.7 | 45778810 ~ 45818361 (+) |
bowfin (Amia calva) | AMCG00018186 | True | 3035 | mRNA | 0.51 | 17 | CM030135.1 | 4033690 ~ 4057473 (-) |