Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU222216 |
| length | 18973 |
| RNA type | TUCP |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G195643 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 1542931 ~ 1563337 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0030201 | heparan sulfate proteoglycan metabolic process | biological_process |
| id | description |
|---|---|
| K09678 | HS3ST4; [heparan sulfate]-glucosamine 3-sulfotransferase 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU222125 | lncRNA | upstream | 142408 | 1396763 ~ 1397086 (+) | True | G195564 |
| TU222096 | lncRNA | upstream | 154524 | 1384752 ~ 1384970 (+) | True | G195535 |
| TU221541 | lncRNA | upstream | 310061 | 1229228 ~ 1229433 (+) | True | G195049 |
| TU221540 | lncRNA | upstream | 310575 | 1228716 ~ 1228919 (+) | True | G195048 |
| TU221539 | lncRNA | upstream | 311627 | 1227485 ~ 1227867 (+) | True | G195047 |
| TU222506 | lncRNA | downstream | 180463 | 1743800 ~ 1744017 (+) | True | G195909 |
| TU222644 | lncRNA | downstream | 303167 | 1866504 ~ 1866807 (+) | True | G196035 |
| TU222647 | lncRNA | downstream | 307361 | 1870698 ~ 1870980 (+) | True | G196038 |
| TU222568 | lncRNA | downstream | 324740 | 1888077 ~ 1959148 (+) | True | G195965 |
| TU222659 | lncRNA | downstream | 397882 | 1961219 ~ 1961759 (+) | True | G196050 |
| CI01000046_01318513_01343464.mRNA | mRNA | upstream | 195299 | 1316670 ~ 1344195 (+) | True | CI01000046_01318513_01343464 |
| CI01000046_01289846_01293954.mRNA | mRNA | upstream | 245158 | 1289568 ~ 1294336 (+) | True | CI01000046_01289846_01293954 |
| CI01000046_01275798_01283718.mRNA | mRNA | upstream | 255394 | 1275798 ~ 1284100 (+) | True | CI01000046_01275798_01283718 |
| CI01000046_01255895_01262232.mRNA | mRNA | upstream | 276947 | 1255895 ~ 1262547 (+) | True | CI01000046_01255895_01262232 |
| CI01000046_01246234_01251650.mRNA | mRNA | upstream | 287805 | 1245732 ~ 1251689 (+) | True | CI01000046_01246234_01251650 |
| CI01000046_01865451_01881353.mRNA | mRNA | downstream | 302114 | 1865451 ~ 1881369 (+) | False | CI01000046_01865451_01881353 |
| CI01000046_01903950_01922429.mRNA | mRNA | downstream | 338753 | 1902090 ~ 1922439 (+) | True | CI01000046_01903950_01922429 |
| CI01000046_01933932_01935589.mRNA | mRNA | downstream | 369553 | 1932890 ~ 1937822 (+) | True | CI01000046_01933932_01935589 |
| CI01000046_01963803_01965901.mRNA | mRNA | downstream | 400218 | 1963555 ~ 1967052 (+) | False | CI01000046_01963803_01965901 |
| CI01000046_01988070_01995034.mRNA | mRNA | downstream | 422983 | 1986320 ~ 1995330 (+) | True | CI01000046_01988070_01995034 |
| TU221488 | other | upstream | 377804 | 1161157 ~ 1161690 (+) | True | G195003 |
| TU221152 | other | upstream | 1079149 | 458008 ~ 460345 (+) | True | G194721 |
| TU222565 | other | downstream | 309458 | 1872795 ~ 1873083 (+) | False | G195965 |
| TU222567 | other | downstream | 309458 | 1872795 ~ 1959148 (+) | True | G195965 |
| TU222725 | other | downstream | 876580 | 2439917 ~ 2440072 (+) | False | G196108 |
| TU223597 | other | downstream | 1623658 | 3186995 ~ 3194271 (+) | True | G196936 |
| TU223494 | other | downstream | 2380491 | 3943828 ~ 3945500 (+) | True | CI01000046_03943890_03945302 |
