RNA id: CI01000046_01865451_01881353.mRNA



Basic Information


Item Value
RNA id CI01000046_01865451_01881353.mRNA
length 995
RNA type mRNA
GC content 0.41
exon number 7
gene id CI01000046_01865451_01881353
representative False

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1865451 ~ 1881369 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TAAAGATTTTGAGCCAACCACACCACTGCAGGAGGCTGAACTCTGGCCTGCCCTGCTGGATGAGGCTGAAGCAGAGGAGGGTGAAGTGCTGAAGTGTGCTTGGGAAAACAGCCAGCAGGTGATAAAGCTGCTTAATGGCCATGGGAGAAATCATGTCTTTAACAGAACAAAAAAGCACAATGAAACGTTCACATGCAAATGCGCAAAAGAACCCACAGAGAAGGACTTGAAGTGTTTCAATGACTATGAGACAGAAATGAAGTGCAGTTTTGAGTCTGACGGCCTCATAAGTTGCTCTGGATACAAACTCAATATCACACGTAATGAAGCAGATGTGTTAAAAGAATATACATGCATCTTTGAGAGAAGTCATCACAGTCCCAGTTGTGAATGTAAAATTGAAGTCCAAGGGTTTTCTACTTCTGAGATATTCACTACTACACTTCTGGAAGGAACAAACATTTTATTAAATGAAAACTTCACAACACATGATTTCATCAAACCGAAAACTCCAGTTTTATCAGTGCAGAAGACTGAAAATGGAAATTTTAATGTAACTTGGGATGACAAGTACACAAGTTATTCTACAGGACATTTTGTAGAGAGTTTGGAAATACATCTGAGCTATAGGATTAAAGGAGAAGATGAAACATTCTCCAAAAAGGTGTCAAATTCAGTGGGATTCTTTGAGATTGTGGGCACAATTCTCCAGCCAAACACCGACTACATTCTGACAGCAAGAATGAGCACAAACTATAATGAACACAAGATACTGAGTGACCAGAGCGCACCAGTTGAGTTCACCAGCCCATCTTTAGGGATAGGTATTGTGTTGACATGCAAACTTGCGGTTGTATTACAACACCAATGTCAAGTTACAAAAAAAGCCACGAAGTTGCATGACATCCTCAATGCGACATGCTACATCAAATCAATTGTGCGTTTGTCCAAGCATTCAAACACCGACATCGTAGTCTGACTGAGACAGATTTACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU222506 lncRNA upstream 121434 1743800 ~ 1744017 (+) True G195909
TU222125 lncRNA upstream 468365 1396763 ~ 1397086 (+) True G195564
TU222096 lncRNA upstream 480481 1384752 ~ 1384970 (+) True G195535
TU221541 lncRNA upstream 636018 1229228 ~ 1229433 (+) True G195049
TU221540 lncRNA upstream 636532 1228716 ~ 1228919 (+) True G195048
TU222568 lncRNA downstream 6708 1888077 ~ 1959148 (+) True G195965
TU222659 lncRNA downstream 79850 1961219 ~ 1961759 (+) True G196050
TU222660 lncRNA downstream 80877 1962246 ~ 1962532 (+) True G196051
TU222580 lncRNA downstream 85363 1966732 ~ 1968371 (+) True CI01000046_01963803_01965901
TU222587 lncRNA downstream 115754 1997123 ~ 1999094 (+) True G195978
CI01000046_01540075_01668012.mRNA mRNA upstream 197439 1540075 ~ 1668012 (+) False CI01000046_01540075_01668012
CI01000046_01318513_01343464.mRNA mRNA upstream 521256 1316670 ~ 1344195 (+) True CI01000046_01318513_01343464
CI01000046_01289846_01293954.mRNA mRNA upstream 571115 1289568 ~ 1294336 (+) True CI01000046_01289846_01293954
CI01000046_01275798_01283718.mRNA mRNA upstream 581351 1275798 ~ 1284100 (+) True CI01000046_01275798_01283718
CI01000046_01255895_01262232.mRNA mRNA upstream 602904 1255895 ~ 1262547 (+) True CI01000046_01255895_01262232
CI01000046_01903950_01922429.mRNA mRNA downstream 20721 1902090 ~ 1922439 (+) True CI01000046_01903950_01922429
CI01000046_01933932_01935589.mRNA mRNA downstream 51521 1932890 ~ 1937822 (+) True CI01000046_01933932_01935589
CI01000046_01963803_01965901.mRNA mRNA downstream 82186 1963555 ~ 1967052 (+) False CI01000046_01963803_01965901
CI01000046_01988070_01995034.mRNA mRNA downstream 104951 1986320 ~ 1995330 (+) True CI01000046_01988070_01995034
CI01000046_02006028_02024639.mRNA mRNA downstream 124659 2006028 ~ 2024940 (+) True CI01000046_02006028_02024639
TU222216 other upstream 302114 1542931 ~ 1563337 (+) True G195643
TU221488 other upstream 703761 1161157 ~ 1161690 (+) True G195003
TU221152 other upstream 1405106 458008 ~ 460345 (+) True G194721
TU222725 other downstream 558548 2439917 ~ 2440072 (+) False G196108
TU223597 other downstream 1305626 3186995 ~ 3194271 (+) True G196936
TU223494 other downstream 2062459 3943828 ~ 3945500 (+) True CI01000046_03943890_03945302
TU223720 other downstream 2268054 4149423 ~ 4149780 (+) True G197055
TU223789 other downstream 2489642 4371011 ~ 4371430 (+) True G197121

Expression Profile