RNA id: CI01000046_03544999_03551574.mRNA



Basic Information


Item Value
RNA id CI01000046_03544999_03551574.mRNA
length 1532
RNA type mRNA
GC content 0.37
exon number 12
gene id CI01000046_03544999_03551574
representative True

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 3544999 ~ 3551897 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGATTGACTTCTCATCTCTGTCTGTGACCTGGACCCTGGTGGTTCTGGTCATAACTCTCCTGTTTATTTACGGTGTTTGGCCACATGGATTTTTCAACAAACTGGGAATTCCAGGACCAAGACCTTGGCCTTTCGTTGGCACATTTCTCTCATACTCTAAAGGTTTGTTTAATTTTGATATGGAGTGTGCTAAGAAGTATGGAAAAGTTTGGGGGATTTATGATGGAAGACTCCCAATATTAATGGTCACTGACCTGGAAATGATCAAAACAATTATGGTGAAAGATTGTTATTCTACCTTCACTAACAGAAGAATATTTCCCATAGCTGTGACACATGCAGATCGTTTTATTAAAAACATGCAAAAGCGAGACCACGAGCAGCCAGTTAAAACAAAAGAAGTTGTCGCTCCATATAGTTTGGATGTCGTCACCAGCTCCTCCTTTAGCGTTGACATCGACTCCATAAACAACCCGGATGATCCTTTCGTTACTAACATCAAGAAGTTTTTCCAGTTCAGTCTGTTCAGTCCTCTCATTCTGCTTTTAACTTTATTTCCCTCCATTGCAAATCTTTTGGGAAAAATGGGGATAAGTCTTTTTTCAAGGTCGTCTATGGATTTTTTCTACAATACCTTGAGAAAGATTAAGGACGAGCACAACAAGAAACCAGATGGTCGAGTAGATTTTCTCAAGCTCATGATCCAGAATCAAATACCTGATGATCAAGCTAAGGACGATACAAGTGACCAGCCAGCAAAAGGGCTAACAGATCATGAGATTCTCTCACAGTCCTTCGTTTTCATCCTCGGAGGTTATGAAACTACAAGCTCCACTCTCACTTTCCTCCTCTATAATCTTGCGACTAATCCAGACTCCCTGGAAAAGCTGGTTGAGGAGATTGACACAAACTTCCCTCCTGATCTCTGGGATTCTCCTGATGAGTTCAGGCCGGAGAGGTTCAGCCCAGAGAGTAAATCAGAGATTAACCAGTACGCTTTCATGCCTTTTGGACTCGGGCCTCGGAATTGCATTGGAATGAGATTTGCCCTAATGATCATGAAACTGCTTGTTGTGAAGCTTCTTCAGAACTTCACTGTGGAAACATGTAAAGAGACACAGATCCCTCTAGAGATGAATGTTATTTTTCAGCCGAAGGTTCCCATCACACTGAAGTTTATTCCAAGACCTCACAAGGAAAAACAATAATTAAAATACTGATCATTTCAACATAATTGCGTAGATGTTATACAAGTTATATAGTATAAGAAAAACTGCATACAGTATAGTTTCATTTTAAAAATATCATAGATATATTTACTGCCTTTTTTTTTTTTTTTACATGCTTTTAGATTTATGGTGCTCATGGTTTGCTGGGCCTTGACCTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCTCTGCAGGTTCAGCCCAGAGA

Function


GO:

id name namespace
GO:0004497 monooxygenase activity molecular_function

KEGG:

id description

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU223552 lncRNA upstream 305663 3213752 ~ 3220825 (+) True G196891
TU223447 lncRNA upstream 404120 3123686 ~ 3123701 (+) True G196787
TU223443 lncRNA upstream 460879 3082933 ~ 3084120 (+) True G196784
TU223469 lncRNA upstream 501517 3043191 ~ 3043482 (+) True G196809
TU223439 lncRNA upstream 521606 3023159 ~ 3023393 (+) True G196780
TU223637 lncRNA downstream 10600 3562497 ~ 3563548 (+) True G196975
TU223546 lncRNA downstream 70815 3622712 ~ 3642563 (+) True G196885
TU223518 lncRNA downstream 87012 3638909 ~ 3641270 (+) True G196857
TU223507 lncRNA downstream 92286 3644183 ~ 3644698 (+) True G196846
TU223657 lncRNA downstream 219945 3771842 ~ 3772078 (+) True G196994
CI01000046_03511698_03542614.mRNA mRNA upstream 2155 3511405 ~ 3542844 (+) True CI01000046_03511698_03542614
CI01000046_03443490_03508344.mRNA mRNA upstream 36518 3443277 ~ 3508481 (+) True CI01000046_03443490_03508344
CI01000046_03347042_03438271.mRNA mRNA upstream 106728 3347042 ~ 3438271 (+) True CI01000046_03347042_03438271
CI01000046_03205894_03253907.mRNA mRNA upstream 290669 3205592 ~ 3254330 (+) False CI01000046_03205894_03253907
CI01000046_03138487_03139142.mRNA mRNA upstream 405308 3138487 ~ 3139691 (+) False CI01000046_03138487_03139142
CI01000046_03556534_03559710.mRNA mRNA downstream 4309 3556206 ~ 3559837 (+) True CI01000046_03556534_03559710
CI01000046_03572743_03591418.mRNA mRNA downstream 18846 3570743 ~ 3591453 (+) True CI01000046_03572743_03591418
CI01000046_03596032_03605678.mRNA mRNA downstream 43571 3595468 ~ 3605846 (+) True CI01000046_03596032_03605678
CI01000046_03624314_03633087.mRNA mRNA downstream 72417 3624314 ~ 3633201 (+) True CI01000046_03624314_03633087
CI01000046_03680288_03699097.mRNA mRNA downstream 128391 3680288 ~ 3699097 (+) True CI01000046_03680288_03699097
TU223597 other upstream 350728 3186995 ~ 3194271 (+) True G196936
TU222725 other upstream 1087719 2439917 ~ 2440072 (+) False G196108
TU222567 other upstream 1585851 1872795 ~ 1959148 (+) True G195965
TU222565 other upstream 1670298 1872795 ~ 1873083 (+) False G195965
TU222216 other upstream 1981662 1542931 ~ 1563337 (+) True G195643
TU223494 other downstream 391931 3943828 ~ 3945500 (+) True CI01000046_03943890_03945302
TU223720 other downstream 597526 4149423 ~ 4149780 (+) True G197055
TU223789 other downstream 819114 4371011 ~ 4371430 (+) True G197121
TU223530 other downstream 863633 4415530 ~ 4421687 (+) True G196869
TU224052 other downstream 1722485 5274382 ~ 5276453 (+) True G197352

Expression Profile