RNA id: CI01000046_04081845_04083512.mRNA



Basic Information


Item Value
RNA id CI01000046_04081845_04083512.mRNA
length 363
RNA type mRNA
GC content 0.42
exon number 2
gene id CI01000046_04081845_04083512
representative True

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4081721 ~ 4083535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATACAAAAGAAACTGGAGCTTGCATGAAGGATCACATTGTTTCTCTGCACCGATTCACGCCTAACGGAATTTCTATCAATCTGAGACGGTGCAGGCTGTGATATATCACTGATTCGGCTTCAGGATGATGAAGTTTAGGTTCAGACGGCAGGGAAATGACCCTCATCGTGAGAAAATCAAGCAGGATCTATTTGCATTCAATAAGACAGTTGAACATGGATTCCCAAACCAGCCAAGTGCTTTGGCCTATGATCCCAAACTGCAGCTTATGGCCATTGGAACTAAATCAGGGGCCATCAAAATGTATCCTTTTGTTAGCGCTTTACTGCCATGGAATTAATGATATAGGATCACTTTTTGTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU223703 lncRNA upstream 130893 3950585 ~ 3950828 (+) True G197039
TU223688 lncRNA upstream 166884 3914584 ~ 3914837 (+) True G197024
TU223548 lncRNA upstream 189880 3891020 ~ 3891841 (+) True G196887
TU223657 lncRNA upstream 309643 3771842 ~ 3772078 (+) True G196994
TU223507 lncRNA upstream 437023 3644183 ~ 3644698 (+) True G196846
TU223532 lncRNA downstream 42463 4125998 ~ 4126444 (+) True G196871
TU223528 lncRNA downstream 43342 4126877 ~ 4127188 (+) True G196867
TU223715 lncRNA downstream 44078 4127613 ~ 4128009 (+) True G197051
TU223531 lncRNA downstream 44970 4128505 ~ 4128795 (+) True G196870
TU223716 lncRNA downstream 50753 4134288 ~ 4137233 (+) True G197052
CI01000046_04040958_04080846.mRNA mRNA upstream 402 4040023 ~ 4081319 (+) True CI01000046_04040958_04080846
CI01000046_04024795_04028000.mRNA mRNA upstream 53721 4024551 ~ 4028000 (+) True CI01000046_04024795_04028000
CI01000046_03998572_04009276.mRNA mRNA upstream 71505 3998572 ~ 4010216 (+) True CI01000046_03998572_04009276
CI01000046_03982069_03996142.mRNA mRNA upstream 84558 3982069 ~ 3997163 (+) True CI01000046_03982069_03996142
CI01000046_03971520_03980002.mRNA mRNA upstream 101619 3971520 ~ 3980102 (+) True CI01000046_03971520_03980002
CI01000046_04098044_04120141.mRNA mRNA downstream 12696 4096231 ~ 4120352 (+) True CI01000046_04098044_04120141
CI01000046_04274035_04275654.mRNA mRNA downstream 190317 4273852 ~ 4275762 (+) True CI01000046_04274035_04275654
CI01000046_04308380_04317709.mRNA mRNA downstream 224845 4308380 ~ 4317970 (+) True CI01000046_04308380_04317709
CI01000046_04319601_04326459.mRNA mRNA downstream 236066 4319601 ~ 4326532 (+) True CI01000046_04319601_04326459
CI01000046_04478947_04510165.mRNA mRNA downstream 395412 4478947 ~ 4511125 (+) True CI01000046_04478947_04510165
TU223494 other upstream 136221 3943828 ~ 3945500 (+) True CI01000046_03943890_03945302
TU223597 other upstream 887450 3186995 ~ 3194271 (+) True G196936
TU222725 other upstream 1624441 2439917 ~ 2440072 (+) False G196108
TU222567 other upstream 2122573 1872795 ~ 1959148 (+) True G195965
TU222565 other upstream 2207020 1872795 ~ 1873083 (+) False G195965
TU223720 other downstream 65888 4149423 ~ 4149780 (+) True G197055
TU223789 other downstream 287476 4371011 ~ 4371430 (+) True G197121
TU223530 other downstream 331995 4415530 ~ 4421687 (+) True G196869
TU224052 other downstream 1190847 5274382 ~ 5276453 (+) True G197352
TU224234 other downstream 1642586 5726121 ~ 5742684 (+) True G197528

Expression Profile