Item | Value |
---|---|
RNA id | TU222806 |
length | 224 |
lncRNA type | inter_gene |
GC content | 0.51 |
exon number | 1 |
gene id | G196177 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000046 |
NCBI id | null |
chromosome length | 7063170 |
location | 2301855 ~ 2302078 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU222805 | lncRNA | upstream | 59 | 2301426 ~ 2301796 (+) | True | G196176 |
TU222793 | lncRNA | upstream | 18089 | 2283538 ~ 2283766 (+) | True | G196164 |
TU222785 | lncRNA | upstream | 37793 | 2263831 ~ 2264062 (+) | True | G196156 |
TU222784 | lncRNA | upstream | 38480 | 2263141 ~ 2263375 (+) | True | G196155 |
TU222783 | lncRNA | upstream | 39373 | 2262248 ~ 2262482 (+) | True | G196154 |
TU222743 | lncRNA | downstream | 7742 | 2309820 ~ 2649187 (+) | True | G196119 |
TU222838 | lncRNA | downstream | 83672 | 2385750 ~ 2386244 (+) | True | G196209 |
TU222724 | lncRNA | downstream | 135772 | 2437850 ~ 2481044 (+) | True | G196107 |
TU222728 | lncRNA | downstream | 137839 | 2439917 ~ 2445456 (+) | True | G196108 |
TU222729 | lncRNA | downstream | 137839 | 2439917 ~ 2440072 (+) | True | G196108 |
CI01000046_02264732_02268319.mRNA | mRNA | upstream | 33217 | 2264572 ~ 2268638 (+) | True | CI01000046_02264732_02268319 |
CI01000046_02123765_02158243.mRNA | mRNA | upstream | 143612 | 2123765 ~ 2158243 (+) | True | CI01000046_02123765_02158243 |
CI01000046_02066859_02072868.mRNA | mRNA | upstream | 228841 | 2066859 ~ 2073014 (+) | True | CI01000046_02066859_02072868 |
CI01000046_02037519_02037782.mRNA | mRNA | upstream | 262800 | 2037519 ~ 2039055 (+) | False | CI01000046_02037519_02037782 |
CI01000046_02027256_02031337.mRNA | mRNA | upstream | 270404 | 2027154 ~ 2031451 (+) | True | CI01000046_02027256_02031337 |
CI01000046_02335530_02348525.mRNA | mRNA | downstream | 31896 | 2333974 ~ 2348945 (+) | True | CI01000046_02335530_02348525 |
CI01000046_02356713_02359204.mRNA | mRNA | downstream | 54576 | 2356654 ~ 2360009 (+) | True | CI01000046_02356713_02359204 |
CI01000046_02365658_02365816.mRNA | mRNA | downstream | 63580 | 2365658 ~ 2366186 (+) | True | CI01000046_02365658_02365816 |
CI01000046_02451052_02454565.mRNA | mRNA | downstream | 148974 | 2451052 ~ 2454671 (+) | False | CI01000046_02451052_02454565 |
CI01000046_02616123_02661535.mRNA | mRNA | downstream | 313969 | 2616047 ~ 2661964 (+) | True | CI01000046_02616123_02661535 |
TU222567 | other | upstream | 342707 | 1872795 ~ 1959148 (+) | True | G195965 |
TU222565 | other | upstream | 427154 | 1872795 ~ 1873083 (+) | False | G195965 |
TU222216 | other | upstream | 738518 | 1542931 ~ 1563337 (+) | True | G195643 |
TU221488 | other | upstream | 1140165 | 1161157 ~ 1161690 (+) | True | G195003 |
TU221152 | other | upstream | 1841510 | 458008 ~ 460345 (+) | True | G194721 |
TU222725 | other | downstream | 137839 | 2439917 ~ 2440072 (+) | False | G196108 |
TU223597 | other | downstream | 884917 | 3186995 ~ 3194271 (+) | True | G196936 |
TU223494 | other | downstream | 1641750 | 3943828 ~ 3945500 (+) | True | CI01000046_03943890_03945302 |
TU223720 | other | downstream | 1847345 | 4149423 ~ 4149780 (+) | True | G197055 |
TU223789 | other | downstream | 2068933 | 4371011 ~ 4371430 (+) | True | G197121 |