Item | Value |
---|---|
RNA id | TU223703 |
length | 244 |
lncRNA type | inter_gene |
GC content | 0.35 |
exon number | 1 |
gene id | G197039 |
representative | True |
Item | Value |
---|---|
chromosome id | CI01000046 |
NCBI id | null |
chromosome length | 7063170 |
location | 3950585 ~ 3950828 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
species | grasscarp (Ctenopharyngodon idella) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU223688 | lncRNA | upstream | 35748 | 3914584 ~ 3914837 (+) | True | G197024 |
TU223548 | lncRNA | upstream | 58744 | 3891020 ~ 3891841 (+) | True | G196887 |
TU223657 | lncRNA | upstream | 178507 | 3771842 ~ 3772078 (+) | True | G196994 |
TU223507 | lncRNA | upstream | 305887 | 3644183 ~ 3644698 (+) | True | G196846 |
TU223546 | lncRNA | upstream | 308022 | 3622712 ~ 3642563 (+) | True | G196885 |
TU223532 | lncRNA | downstream | 175170 | 4125998 ~ 4126444 (+) | True | G196871 |
TU223528 | lncRNA | downstream | 176049 | 4126877 ~ 4127188 (+) | True | G196867 |
TU223715 | lncRNA | downstream | 176785 | 4127613 ~ 4128009 (+) | True | G197051 |
TU223531 | lncRNA | downstream | 177677 | 4128505 ~ 4128795 (+) | True | G196870 |
TU223716 | lncRNA | downstream | 183460 | 4134288 ~ 4137233 (+) | True | G197052 |
CI01000046_03943890_03945302.mRNA | mRNA | upstream | 5213 | 3943794 ~ 3945372 (+) | False | CI01000046_03943890_03945302 |
CI01000046_03887074_03887701.mRNA | mRNA | upstream | 62546 | 3886910 ~ 3888039 (+) | True | CI01000046_03887074_03887701 |
CI01000046_03794654_03799486.mRNA | mRNA | upstream | 150559 | 3793720 ~ 3800026 (+) | True | CI01000046_03794654_03799486 |
CI01000046_03721265_03754551.mRNA | mRNA | upstream | 195804 | 3720682 ~ 3754781 (+) | True | CI01000046_03721265_03754551 |
CI01000046_03712603_03713730.mRNA | mRNA | upstream | 236394 | 3712472 ~ 3714191 (+) | True | CI01000046_03712603_03713730 |
CI01000046_03953528_03957334.mRNA | mRNA | downstream | 2277 | 3953105 ~ 3957695 (+) | True | CI01000046_03953528_03957334 |
CI01000046_03959320_03963204.mRNA | mRNA | downstream | 7720 | 3958548 ~ 3963204 (+) | True | CI01000046_03959320_03963204 |
CI01000046_03964744_03965521.mRNA | mRNA | downstream | 13916 | 3964744 ~ 3965543 (+) | True | CI01000046_03964744_03965521 |
CI01000046_03971520_03980002.mRNA | mRNA | downstream | 20692 | 3971520 ~ 3980102 (+) | True | CI01000046_03971520_03980002 |
CI01000046_03982069_03996142.mRNA | mRNA | downstream | 31241 | 3982069 ~ 3997163 (+) | True | CI01000046_03982069_03996142 |
TU223494 | other | upstream | 5085 | 3943828 ~ 3945500 (+) | True | CI01000046_03943890_03945302 |
TU223597 | other | upstream | 756314 | 3186995 ~ 3194271 (+) | True | G196936 |
TU222725 | other | upstream | 1493305 | 2439917 ~ 2440072 (+) | False | G196108 |
TU222567 | other | upstream | 1991437 | 1872795 ~ 1959148 (+) | True | G195965 |
TU222565 | other | upstream | 2075884 | 1872795 ~ 1873083 (+) | False | G195965 |
TU223720 | other | downstream | 198595 | 4149423 ~ 4149780 (+) | True | G197055 |
TU223789 | other | downstream | 420183 | 4371011 ~ 4371430 (+) | True | G197121 |
TU223530 | other | downstream | 464702 | 4415530 ~ 4421687 (+) | True | G196869 |
TU224052 | other | downstream | 1323554 | 5274382 ~ 5276453 (+) | True | G197352 |
TU224234 | other | downstream | 1775293 | 5726121 ~ 5742684 (+) | True | G197528 |