RNA id: CI01000047_02496216_02496407.mRNA



Basic Information


Item Value
RNA id CI01000047_02496216_02496407.mRNA
length 306
RNA type mRNA
GC content 0.44
exon number 1
gene id CI01000047_02496216_02496407
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 2496216 ~ 2496521 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTCTGTCCAGCACAATGGCCTTCAGAACAAGTGTATTTAGCCTCAGTCAACATGGGCTGAAAAGCAGCCAGAGATCCAGGCATGATAAGCGCACGTCTAGTTATCTTGTTTATGCAAACGGTAACCAGGTTGTCCAGGAGAGAGCAGTGGATGGACTGCAGACTAATGGAGTCCTTTCCCAACTGTCTTAAAACACTCTCTTTAATGGATTCCTAATGCTCAGCCATCTCTCTTATATCCCTGATGTTTGAGCTACAAGAAAACTGTCCTTTGTGATTTTTGGTCTCATGCACTGTATGGATTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU226979 lncRNA upstream 14009 2481825 ~ 2482207 (+) True G200011
TU227042 lncRNA upstream 66000 2429975 ~ 2430216 (+) True G200066
TU227041 lncRNA upstream 66557 2428898 ~ 2429659 (+) True G200065
TU227039 lncRNA upstream 69603 2426259 ~ 2426613 (+) True G200063
TU227038 lncRNA upstream 70973 2424345 ~ 2425243 (+) True G200062
TU227071 lncRNA downstream 83428 2579949 ~ 2580406 (+) True G200090
TU227111 lncRNA downstream 88929 2585450 ~ 2586875 (+) True G200130
TU227113 lncRNA downstream 98629 2595150 ~ 2595473 (+) True G200132
TU227118 lncRNA downstream 99915 2596436 ~ 2598997 (+) True G200133
TU227122 lncRNA downstream 120489 2617010 ~ 2617270 (+) True G200136
CI01000047_02265701_02270952.mRNA mRNA upstream 224551 2265701 ~ 2271665 (+) True CI01000047_02265701_02270952
CI01000047_02233861_02257560.mRNA mRNA upstream 237794 2233593 ~ 2258422 (+) True CI01000047_02233861_02257560
CI01000047_02105957_02212505.mRNA mRNA upstream 283702 2105957 ~ 2212514 (+) True CI01000047_02105957_02212505
CI01000047_01838291_01856228.mRNA mRNA upstream 639627 1837443 ~ 1856589 (+) True CI01000047_01838291_01856228
CI01000047_01831728_01834017.mRNA mRNA upstream 662199 1831728 ~ 1834017 (+) True CI01000047_01831728_01834017
CI01000047_02498979_02505234.mRNA mRNA downstream 2053 2498574 ~ 2505743 (+) True CI01000047_02498979_02505234
CI01000047_02562428_02569496.mRNA mRNA downstream 65772 2562293 ~ 2570388 (+) True CI01000047_02562428_02569496
CI01000047_02581276_02587652.mRNA mRNA downstream 84398 2580919 ~ 2589521 (+) True CI01000047_02581276_02587652
CI01000047_02602977_02614833.mRNA mRNA downstream 106456 2602977 ~ 2615082 (+) True CI01000047_02602977_02614833
CI01000047_02738296_02744806.mRNA mRNA downstream 241351 2737872 ~ 2745013 (+) True CI01000047_02738296_02744806
TU226970 other upstream 177254 2316863 ~ 2318962 (+) True G200003
TU226744 other upstream 743379 1751469 ~ 1752837 (+) True G199784
TU226298 other upstream 1530760 929871 ~ 965456 (+) True G199386
TU226299 other upstream 1663606 829007 ~ 829018 (+) True G199387
TU226313 other upstream 1679132 816480 ~ 817084 (+) True G199401
TU227053 other downstream 24075 2520596 ~ 2577997 (+) True G200076
TU228278 other downstream 522184 3018705 ~ 3088187 (+) True G201186
TU228535 other downstream 1199995 3696516 ~ 3701860 (+) True G201387
TU228781 other downstream 1919292 4415813 ~ 4482457 (+) False G201599
TU229634 other downstream 4319196 6815717 ~ 6816118 (+) True G202382

Expression Profile