Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000047_03087382_03094014.mRNA |
| length | 3793 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 6 |
| gene id | CI01000047_03087382_03094014 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000047 |
| NCBI id | null |
| chromosome length | 7523058 |
| location | 3087080 ~ 3096017 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0048854 | brain morphogenesis | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230072 | lncRNA | downstream | 114119 | 2966977 ~ 2972961 (-) | True | G202747 |
| TU230063 | lncRNA | downstream | 120481 | 2965854 ~ 2966599 (-) | True | G202740 |
| TU230099 | lncRNA | downstream | 187263 | 2896064 ~ 2899817 (-) | True | G202774 |
| TU230092 | lncRNA | downstream | 198285 | 2888578 ~ 2888795 (-) | True | G202767 |
| TU230091 | lncRNA | downstream | 200562 | 2886206 ~ 2886518 (-) | True | G202766 |
| TU230131 | lncRNA | upstream | 1824 | 3097841 ~ 3100120 (-) | True | G202792 |
| TU230082 | lncRNA | upstream | 17265 | 3113282 ~ 3113978 (-) | True | G202757 |
| TU230049 | lncRNA | upstream | 36296 | 3132313 ~ 3133652 (-) | False | G202733 |
| TU230051 | lncRNA | upstream | 36296 | 3132313 ~ 3133652 (-) | False | G202733 |
| TU230194 | lncRNA | upstream | 236149 | 3332166 ~ 3334561 (-) | True | G202847 |
| CI01000047_03085017_03085558.mRNA | mRNA | downstream | 1389 | 3084995 ~ 3085691 (-) | True | CI01000047_03085017_03085558 |
| CI01000047_03080182_03082134.mRNA | mRNA | downstream | 4946 | 3080086 ~ 3082134 (-) | True | CI01000047_03080182_03082134 |
| CI01000047_03002349_03064708.mRNA | mRNA | downstream | 21393 | 3002349 ~ 3065687 (-) | True | CI01000047_03002349_03064708 |
| CI01000047_02939538_02940848.mRNA | mRNA | downstream | 144662 | 2939493 ~ 2942418 (-) | True | CI01000047_02939538_02940848 |
| CI01000047_02829408_02858055.mRNA | mRNA | downstream | 228518 | 2828456 ~ 2858562 (-) | True | CI01000047_02829408_02858055 |
| CI01000047_03115498_03127047.mRNA | mRNA | upstream | 19170 | 3115187 ~ 3128105 (-) | True | CI01000047_03115498_03127047 |
| CI01000047_03136341_03145907.mRNA | mRNA | upstream | 39895 | 3135912 ~ 3145907 (-) | True | CI01000047_03136341_03145907 |
| CI01000047_03149971_03159412.mRNA | mRNA | upstream | 53943 | 3149960 ~ 3159412 (-) | True | CI01000047_03149971_03159412 |
| CI01000047_03163127_03175326.mRNA | mRNA | upstream | 66849 | 3162866 ~ 3175326 (-) | True | CI01000047_03163127_03175326 |
| CI01000047_03177108_03216092.mRNA | mRNA | upstream | 81066 | 3177083 ~ 3216132 (-) | True | CI01000047_03177108_03216092 |
| TU227734 | other | downstream | 1371563 | 1706068 ~ 1715517 (-) | True | CI01000047_01708628_01744282 |
| TU227498 | other | downstream | 2252609 | 833941 ~ 834471 (-) | True | G200472 |
| TU227419 | other | downstream | 2564838 | 519108 ~ 522242 (-) | True | CI01000047_00519408_00522108 |
| TU227300 | other | downstream | 2819045 | 267530 ~ 268035 (-) | True | G200299 |
| TU230047 | other | upstream | 36296 | 3132313 ~ 3133652 (-) | False | G202733 |
| TU230052 | other | upstream | 36296 | 3132313 ~ 3133652 (-) | True | G202733 |
| TU230337 | other | upstream | 701786 | 3985342 ~ 3986402 (-) | True | G202944 |
| TU230541 | other | upstream | 1117392 | 4214294 ~ 4214430 (-) | True | G203128 |
| TU230539 | other | upstream | 1182891 | 4278908 ~ 4278976 (-) | True | G203126 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00008980 | False | 2019 | mRNA | 0.50 | 9 | NC_007123.7 | 5189776 ~ 5204629 (+) |
| bowfin (Amia calva) | AMCG00002891 | True | 4312 | mRNA | 0.43 | 11 | CM030139.1 | 5715412 ~ 5730295 (+) |
