RNA id: TU230337


Basic Information

Item Value
RNA id TU230337
length 240
RNA type TUCP
GC content 0.42
exon number 2
gene id G202944
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 3985342 ~ 3986402 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACAACTAGGACTCATCTTCACTTTCATTTATTGCCTTGACTGTCTTACCTCATGCGTCCTCCATATCTACATTTGACAAGTTACAATGGACCACAACTTTTGTATCAGATTATGCATCTTTTGTGTATCTCAGTCGGTGATGGCTTTTAACATCGAGCCTGTTACCTGGAAAACTTTCACTGCGTCTTCACAGAGTCAAAATGTTGCCTTTGGCTATAAGGTGATACAGAAAGACACAAGTCTATTTGTGAGTGATCCTTTAATACAACTCAGTCAAACTCTGAGAGGACAAATATATCGCTGTGCTGTCACTGAAGGAAACTGCATGCCACTGCCCATTACCGTCACCAATGAGGCTGTCAACATGTCACTTGGACTTTCAATGTCTATTGATCCTCAGTCTTCAAGAGCAGTGGTTTGTGGTCCAACCATACCTAAGAACTGTGATGCAGTAACCACTTACAATGGCATGTGCTTTGAAATCAGTCCAGATAATGTTGTGAGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230421 lncRNA downstream 22863 3774503 ~ 3774940 (-) True G203022
TU230413 lncRNA downstream 41404 3756169 ~ 3756399 (-) True G203017
TU230339 lncRNA downstream 42020 3754787 ~ 3755783 (-) True G202946
TU230324 lncRNA downstream 44972 3752112 ~ 3752831 (-) True G202938
TU230346 lncRNA downstream 58063 3729962 ~ 3739740 (-) True G202952
TU230470 lncRNA upstream 18231 4004633 ~ 4075704 (-) True G203067
TU230321 lncRNA upstream 28671 4015073 ~ 4018863 (-) True G202935
TU230354 lncRNA upstream 58308 4044710 ~ 4052438 (-) True G202959
TU230316 lncRNA upstream 89517 4075919 ~ 4080229 (-) False G202934
TU230318 lncRNA upstream 89517 4075919 ~ 4086107 (-) True G202934
CI01000047_03741720_03750331.mRNA mRNA downstream 47428 3741070 ~ 3750375 (-) True CI01000047_03741720_03750331
CI01000047_03713156_03716003.mRNA mRNA downstream 81800 3713156 ~ 3716003 (-) True CI01000047_03713156_03716003
CI01000047_03689400_03699969.mRNA mRNA downstream 97834 3689400 ~ 3699969 (-) True CI01000047_03689400_03699969
CI01000047_03514753_03523245.mRNA mRNA downstream 274558 3514451 ~ 3523245 (-) True CI01000047_03514753_03523245
CI01000047_03412414_03435209.mRNA mRNA downstream 361620 3412398 ~ 3436183 (-) True CI01000047_03412414_03435209
CI01000047_04022011_04032483.mRNA mRNA upstream 35343 4021745 ~ 4032666 (-) False CI01000047_04022011_04032483
CI01000047_04105620_04111019.mRNA mRNA upstream 119021 4105423 ~ 4111184 (-) True CI01000047_04105620_04111019
CI01000047_04128025_04134725.mRNA mRNA upstream 141500 4127902 ~ 4134725 (-) True CI01000047_04128025_04134725
CI01000047_04137872_04142531.mRNA mRNA upstream 151197 4137599 ~ 4142531 (-) True CI01000047_04137872_04142531
CI01000047_04213574_04213976.mRNA mRNA upstream 227019 4213421 ~ 4213976 (-) False CI01000047_04213574_04213976
TU230047 other downstream 664151 3132313 ~ 3133652 (-) False G202733
TU230052 other downstream 664151 3132313 ~ 3133652 (-) True G202733
TU227734 other downstream 2082286 1706068 ~ 1715517 (-) True CI01000047_01708628_01744282
TU227498 other downstream 2963332 833941 ~ 834471 (-) True G200472
TU227419 other downstream 3275561 519108 ~ 522242 (-) True CI01000047_00519408_00522108
TU230541 other upstream 227007 4214294 ~ 4214430 (-) True G203128
TU230539 other upstream 292506 4278908 ~ 4278976 (-) True G203126
TU230543 other upstream 587933 4576786 ~ 4576965 (-) True G203130
TU230719 other upstream 887977 4874379 ~ 4876734 (-) True G203286
TU231342 other upstream 1932106 5918508 ~ 5927344 (-) True G203840

Expression Profile