RNA id: TU230543


Basic Information

Item Value
RNA id TU230543
length 180
RNA type TUCP
GC content 0.44
exon number 1
gene id G203130
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4576786 ~ 4576965 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGAAAGAGCAAGAGGAAGGAGGGGGTCCGGACAACAGAAATAGAGAAGAAGAGCTAGAGATCAGAGCTGAGTCTGTTCACAGACGCATAGGACAGGAGCGGAGGAAGACCTCCACGCTGATGATCTCCTAGGAGACATCGGGACATTTCTCTGACTGCTGCGAGTCCCTCCATTCAACAGACAGGATGGCTCGGGACATGTCAGATAAAGAGATCCTGAAGATGGAGCTGGACCAGCTGAAGTTGGAAGTGAACACTCCCCGAATTGCGATTTCAAAAACAGCCCCAGAAATCATTGCTTTCGTTGAGGAGAAGTCTGGCGAAGACCCCCTGGTCAAGGGCGTCCCGGAGGACAAGAACCCATTCAAGGAGAAGGGAGGCTGCATTATCACGTAGCAACGGCCCTGGGGGAACCAGGGCTCTGTTCAATATCTACTTTTGTATAAAGGTTATTTGTACTAGAAACTCTGAATCATTTAGCATCCACTGTAGTTTTGATCATTATTCAGCTCCAGAAGTTTAAGAGGACACCATCATGTCATTCAATATCTTTTGTGATATGATATTTTCTGTCTGCTTTTAAAATAAATTCATTAGCAATCTAAGCAAATATCTTACTGGTTCAAATTTCAGTATCGATGGACTACAGAGACCCTAATTTGACTTTAAAGGGATCGTTCACCCAAAAATGAAACTTCCGTCATCATTTACTCACTCTCAGGTCATTTTAAACCTGTACGACTTATGTTTTGTCCATACAGTCAAAACCACTATAAAGAACCTTTTGTGCAACGAAAAGTATCTACTGAGTGATTTCAGGTCTTTTTCAATTGCATCTGATAAAGGTATTTAAAAAAGGATTGTTGGGGGGGCTGAAAACTGGGGTGTTATCTTGCATTAGCGCTCTGTATGCGTAAAGCTCTGTGAGATTGAATCAGTGGCTGGTGCGTGTCATTGGCTGCTGTGATAACAAGATTTGGTGTCAGGTCTCTCTGTCCCACTAAAGAGCAGCTGCTTCCTACGTTTCGAGAACTTAAGCTCATTCTCTGATCCTCATCTCAGGATTGAGCTTTTCATCCTGTAAGCTCCTTTTCCGTGTTTGTACCGCTGCCCCACTGTCTCGGTCTCCATCTCCTATTTAAATACTGAGCCAGTAATTGGGATGAACTGCAGCTCTTGAATGTGAGCAAAAACCCAACAACAAGGTAGCTACTTGAGTTTGTTTTTGATTGGGTTTCTTTGTGT

Function

GO:

id name namespace
GO:0005834 heterotrimeric G-protein complex cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230644 lncRNA downstream 24078 4550020 ~ 4550257 (-) True G203221
TU230642 lncRNA downstream 28119 4545736 ~ 4546216 (-) False G203219
TU230640 lncRNA downstream 28119 4545933 ~ 4546216 (-) True G203219
TU230641 lncRNA downstream 28203 4545569 ~ 4546132 (-) False G203219
TU230638 lncRNA downstream 28203 4545736 ~ 4546132 (-) False G203219
TU230686 lncRNA upstream 224932 4801897 ~ 4802226 (-) True G203258
TU230732 lncRNA upstream 305688 4882653 ~ 4882903 (-) True G203298
TU230758 lncRNA upstream 358541 4935506 ~ 4948267 (-) True G203323
TU230737 lncRNA upstream 397331 4974296 ~ 4978735 (-) True G203303
TU230792 lncRNA upstream 412192 4989157 ~ 4989456 (-) True G203355
CI01000047_04555399_04568166.mRNA mRNA downstream 6015 4554822 ~ 4568320 (-) True CI01000047_04555399_04568166
CI01000047_04479638_04501854.mRNA mRNA downstream 72362 4479241 ~ 4501973 (-) True CI01000047_04479638_04501854
CI01000047_04458864_04461672.mRNA mRNA downstream 112241 4458771 ~ 4462094 (-) True CI01000047_04458864_04461672
CI01000047_04398951_04431817.mRNA mRNA downstream 142518 4398951 ~ 4431817 (-) True CI01000047_04398951_04431817
CI01000047_04385029_04397861.mRNA mRNA downstream 176474 4384547 ~ 4397861 (-) True CI01000047_04385029_04397861
CI01000047_04589853_04594533.mRNA mRNA upstream 12805 4589770 ~ 4594636 (-) True CI01000047_04589853_04594533
CI01000047_04596548_04605172.mRNA mRNA upstream 19015 4595980 ~ 4605172 (-) True CI01000047_04596548_04605172
CI01000047_04613815_04652751.mRNA mRNA upstream 36850 4613815 ~ 4652751 (-) True CI01000047_04613815_04652751
CI01000047_04703391_04706693.mRNA mRNA upstream 126073 4703038 ~ 4706693 (-) True CI01000047_04703391_04706693
CI01000047_04790377_04795864.mRNA mRNA upstream 213259 4790224 ~ 4796316 (-) True CI01000047_04790377_04795864
TU230539 other downstream 287654 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 359905 4214294 ~ 4214430 (-) True G203128
TU230337 other downstream 587933 3985342 ~ 3986402 (-) True G202944
TU230047 other downstream 1440683 3132313 ~ 3133652 (-) False G202733
TU230052 other downstream 1440683 3132313 ~ 3133652 (-) True G202733
TU230719 other upstream 297414 4874379 ~ 4876734 (-) True G203286
TU231342 other upstream 1341543 5918508 ~ 5927344 (-) True G203840
TU231390 other upstream 1466288 6043253 ~ 6043789 (-) True G203881

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00009883 True 580 mRNA 0.46 3 NC_007123.7 3249054 ~ 3252263 (-)