RNA id: CI01000047_04606043_04610846.mRNA



Basic Information


Item Value
RNA id CI01000047_04606043_04610846.mRNA
length 1496
RNA type mRNA
GC content 0.45
exon number 7
gene id CI01000047_04606043_04610846
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4606043 ~ 4611322 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGGAGATCATATACCGCCAAGGCGTTTGGATGGCGGAGGCTCTTCAGCTGAGGACAAGAAGCTATGAGGATTTCTGGCTAGTTTCTTCTCATATGGGAGACCCGAAAGCTGCAGTTCTCCTCGTCTTTCCGGTTGTGTTTTACATTCATCGACGGACTGGCATCGCTGTTCTCTGGGTAGCAGCTTTATCAGAGTGGCTTAATTTGGTTCTCAAATGGATCCTGTTTGGTGAGAGGCCATATTGGTGGATTGGAGAATCTGGATTGTTTTCTAAAAACCCACCGAAAGTCCAGCAGTTTCTGTCCACCTGCGAGACTGGCCCAGGCAGTCCGTCAGGTCATGCCATGGTCACTAGTGCTGTCTGGTGGCTGATCGTCTCTTCACTGGCGTCATTCTCTCACACTCGCACAGGCAGTAAGATGTTAGCTGCAGTGCCGTATCTGTTGTATGCAGTATTTTTGGGATGCGTGGGCCTTTCACGGATCTTTATCCTGGCTCACTTCCCTCATCAAGTCATTGCAGGTCTTCTGACAGGAGTGTTGCTGGGGATTTATCTGAACCGGACTGTGCCTGAATGTCGCCCTCTGCTGTTCTTCTTTTGCTGTAGCTTGACTTTGCTCTTTGGAACTCTTGTGCTGCATGGTGCCCTGCAAAAGACTGGGATTGATCTTTCTTGGTCCATCTCACTGGCTAAGAGGCGGTGTTCTCGCTCCGAGTGGATCCGTTTGGACACGGCACCCTTCTCCTCTCTGAACCGTGATGCCGGGGTTCTGCTAGGACTAGGACTTTCACAGTATTGGAAGCCAGGTGGATGGGCTCTTCCGTGGGTACCCAGGACTCTCTGTCTGGCCCTCTCGTCCATGGCCCTCCACTACATCAGCAGTTTCCCTGTGCCCACTGTTCCTCCTCTTCTCTTCTACTCCCTGTTCTTTCTGAAATACACCATTGTGCCGCAGCATCTGCCAGAGGAAAAACTAAACTCTGATAACTTTCTATCCTCAACAACCTGCATGATTTGATGTATCATACAGTACTGTATGTCAGTTTAATATGTGGGGGTTTGTCAACTATGAGCAATAGTCGTGATGTTTGTCTTGATTTAATTGGTTGCCACTGAAAGGACAAATAGTACAGTTCTGTAACAGCTGTAGGCATATATTTAAAGGGATAGTTCACCAAAAATGAAAATTTCATCATCATTTACTCACCCTTATGTTGTTCCAAACCTGAATGAGTTTCTTTCTTCTGTTGAAGTCAAAAGATGATATTTTGAATAATGTTTGTAATCAAACAGTTGATGGTAGATATTGACGTCCACTGTAGGAAAAAAAAAATACTATGGAAGTCAACTGTCTGGTCACTAACATTCTTCAGAATATCTTCTTTTGTGTTCAACAGAAGAAAGAAACTCATTCAGGTTTGCAACAACATAAGAGTGAGTAAATGATGATGAAATTTTCATTTTTGGGTGAACTATCCCTTTAAGTAAACCACA

Function


GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU228791 lncRNA upstream 2382 4600298 ~ 4603661 (+) True G201605
TU228786 lncRNA upstream 9413 4573368 ~ 4596630 (+) True G201600
TU228793 lncRNA upstream 29103 4574335 ~ 4576940 (+) True G201607
TU228833 lncRNA upstream 58588 4547252 ~ 4547455 (+) True G201642
TU228832 lncRNA upstream 59906 4545893 ~ 4546137 (+) True G201641
TU228856 lncRNA downstream 8629 4619951 ~ 4623509 (+) True G201658
TU228868 lncRNA downstream 37057 4648379 ~ 4724087 (+) True G201669
TU228883 lncRNA downstream 73009 4684331 ~ 4685358 (+) True G201684
TU228897 lncRNA downstream 121004 4732326 ~ 4733589 (+) True G201698
TU228977 lncRNA downstream 176612 4787934 ~ 4788563 (+) True G201773
CI01000047_04582184_04586359.mRNA mRNA upstream 19247 4582004 ~ 4586796 (+) True CI01000047_04582184_04586359
CI01000047_04471595_04476690.mRNA mRNA upstream 128826 4471125 ~ 4477217 (+) True CI01000047_04471595_04476690
CI01000047_04222867_04253291.mRNA mRNA upstream 352332 4222682 ~ 4253711 (+) True CI01000047_04222867_04253291
CI01000047_04214987_04217836.mRNA mRNA upstream 387566 4214987 ~ 4218477 (+) True CI01000047_04214987_04217836
CI01000047_04198702_04207295.mRNA mRNA upstream 398638 4198702 ~ 4207405 (+) True CI01000047_04198702_04207295
CI01000047_04663268_04663847.mRNA mRNA downstream 50993 4662315 ~ 4663996 (+) True CI01000047_04663268_04663847
CI01000047_04678392_04690824.mRNA mRNA downstream 66670 4677992 ~ 4691097 (+) True CI01000047_04678392_04690824
CI01000047_04826817_04834995.mRNA mRNA downstream 215495 4826817 ~ 4835216 (+) True CI01000047_04826817_04834995
CI01000047_04845691_04876128.mRNA mRNA downstream 234369 4845691 ~ 4876128 (+) True CI01000047_04845691_04876128
CI01000047_04890965_04891981.mRNA mRNA downstream 279643 4890965 ~ 4892131 (+) True CI01000047_04890965_04891981
TU228781 other upstream 123586 4415813 ~ 4482457 (+) False G201599
TU228535 other upstream 904183 3696516 ~ 3701860 (+) True G201387
TU228278 other upstream 1517856 3018705 ~ 3088187 (+) True G201186
TU227053 other upstream 2028046 2520596 ~ 2577997 (+) True G200076
TU226970 other upstream 2287081 2316863 ~ 2318962 (+) True G200003
TU229634 other downstream 2204395 6815717 ~ 6816118 (+) True G202382

Expression Profile