RNA id: CI01000047_07350018_07350608.mRNA



Basic Information


Item Value
RNA id CI01000047_07350018_07350608.mRNA
length 1714
RNA type mRNA
GC content 0.49
exon number 1
gene id CI01000047_07350018_07350608
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7349131 ~ 7350844 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGGTTGATTGAATACTCTGACACTTACACTGCTTGTGCTTTTACACAGCGGATAAGGACGTTGACGACTACTACAGCAGGAAGAGGCATCTTCCAGACCTAGCGGCACGAGGAACTCTTCCTTTGCACATGATCAAGATAAACCAGGAGTCTCAGAGCAGCCAGCAGCAGCAACAGGCCCAGCAACAGCAGCAGCAGCAAGCGCCCCGCCAGCGTCCCCGCAGAGTTCAGAGGGCCATGTCCCAGGACCGCGTGCTGTCCCCCGAACGCAGCCACGCACACGACTACCCGATATCCCCCTACGGCATGCCTCCGTACGGCGGACGCATCCTCTCCGACGAGCAGCTCCTGTCGGCCGAGCGCCTGCGCTCGCACGAGCGGCTCATCTCGCAGGACCGCCACTACTCGCAGGACCGCATCCACGCGCAGGACCGGCTTCACTCTCAGGAACGCCTGCACTCCCAGGACCGCCTCTACTCCCAAGACCGCCTCTACTCGCAAGATCCGCTGATCTCTCCCGACAAGATGATGTCCATCAAGCGCTCCGGGTTCCACAGTTCCGACAAGTCCATGTCCAGAGCCATATCGCACACGGACGTGTTCATGCCCACCACGCCCGTCCTGGACCGCTATAAGATGACAAAAATGCACTCCCATCCCAGTGCCTCAAACAACACCCCACAGAACACTTCTACCATGAACCAGACGGCCTCCAAGAGGCAGGCCTTCGCCTCCCGCCGCACGCAGACGGTGGAGCAGCTGCACTACGTTCCCCAGCAGCATCACCATCACTACCGCACAGGGAGCAAGACCGAAGTAACTGTTTAACTGCTCAGAAACTCACGGACAGTTGAGCCACGAGCCAACAGAAGCGTACAAGAGCCAGACTAGTCTCAGATCCGGACTTTTCCAGCAGTTCTTCAGTAACTGACCCAGCACCAGCTACTCTAGAGTCAATACCCAGACCATTCTGTGTGCATATCCATTCATTTATTTGTGTTCGTTTATCACTGATGAGGAAGGACTTGCTTGCCAGATTCTGCATTCGTAAGGGCTTTGCATGGGGATTTGCAGACAGCGTCAGAAGAAAGAACGTATGATAAAAGGTTTGGACATGGAACAGAACTGTATAAATTTATATATAAATACACACATATATAAATACAAATACTGTTTGTACTTCCGGTCCTAGTCAATAGCTTTAGAAGTTCTTATGATGTTCGCGCACTTCTTTTGGTGCCTCTACGAAAATGTTCCATTTCAGCAACGAAGTGGTTTTGTGGGTTAAAAAGCACAATCAAGTAAAAGTTGAGTTTTGTTCTGTTTTGCTCATTCGTTCGGTGGGTGATGGCTAGCATATATCAGTTTGTTGTTCAATTAATGGCCATTAATTATTTTGCGAAGATGATTGTAAATAAGCTCTTTTAGCACCAGTAAATGGACGAGTCTGTCCTGGTTGGCATTTGTATTATTGTAGTCTGATTTTTAGAGGTTCAAGACTTCTTCAGAACTATAGACAACCCACTAACCCAGTGTTGGATCATTTAAAGTAATATGATACTGTACGTGTGTCCGTTCAAATGTGTTTGTAGAACGAGAATCGGGCGAATGTTGCTGAAAAATATGACAACTGTTGATTTCTGGCTGTAGACTGTGTTGCAGTGACTCACAAGACAAATGAGTATATTATGCTTGTTGTAGTAGCTTCAAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231731 lncRNA downstream 21285 7327497 ~ 7327846 (-) True G204192
TU231725 lncRNA downstream 37469 7311449 ~ 7311662 (-) True G204186
TU231721 lncRNA downstream 42537 7305979 ~ 7306594 (-) True G204182
TU231720 lncRNA downstream 45841 7303046 ~ 7303290 (-) True G204181
TU231716 lncRNA downstream 50578 7298326 ~ 7298553 (-) True G204177
TU231469 lncRNA upstream 4322 7355166 ~ 7368728 (-) True G203943
CI01000047_07137958_07149332.mRNA mRNA downstream 199799 7137384 ~ 7149332 (-) True CI01000047_07137958_07149332
CI01000047_07072890_07079236.mRNA mRNA downstream 269895 7072545 ~ 7079236 (-) True CI01000047_07072890_07079236
CI01000047_07010651_07017023.mRNA mRNA downstream 332108 7010529 ~ 7017023 (-) True CI01000047_07010651_07017023
CI01000047_06993737_07007548.mRNA mRNA downstream 341583 6993722 ~ 7007548 (-) True CI01000047_06993737_07007548
CI01000047_06978552_06982232.mRNA mRNA downstream 366589 6978448 ~ 6982542 (-) True CI01000047_06978552_06982232
CI01000047_07351900_07353699.mRNA mRNA upstream 1023 7351867 ~ 7353753 (-) True CI01000047_07351900_07353699
CI01000047_07389650_07393323.mRNA mRNA upstream 38299 7389143 ~ 7393753 (-) True CI01000047_07389650_07393323
CI01000047_07436294_07437420.mRNA mRNA upstream 84888 7435732 ~ 7437719 (-) True CI01000047_07436294_07437420
CI01000047_07445474_07451503.mRNA mRNA upstream 94015 7444859 ~ 7451503 (-) True CI01000047_07445474_07451503
CI01000047_07453486_07457736.mRNA mRNA upstream 101944 7452788 ~ 7457949 (-) True CI01000047_07453486_07457736
TU231390 other downstream 1305342 6043253 ~ 6043789 (-) True G203881
TU231342 other downstream 1421787 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 2472397 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 2772166 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 3062450 4278908 ~ 4278976 (-) True G203126

Expression Profile