RNA id: CI01000047_07436294_07437420.mRNA


Basic Information

Item Value
RNA id CI01000047_07436294_07437420.mRNA
length 1314
RNA type mRNA
GC content 0.43
exon number 3
gene id CI01000047_07436294_07437420
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7435732 ~ 7437719 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AATATTTTTTTTTCTTGATAGCTTGCAGCAGCAACACTCTCATTTCTCCCAATCGATAGATAGCATATTTTTCAGCACTAAAACATCTTGTAAGATCTAAAATTGTTCCCTGTTTTGTGATCAGCGTGTCGATCATCTCATGAGAATGTTAAGTACAGTCTCTGATTTCGTCGCCTCAAATCTGTAATGAATGTTTTTACAAGATCCCAAAGCCTATTGGAAATGATGTCAAATATTTATTTTTCCTAGAACAGCTTTTGTGAAGAACAGATCTACGCTGCATAATTCAGCGTCAGAAGATGAATGAAGACAGCGATGGCTCTGATCTCATTACAGGAGAGATTCTCAGCTTGAAGAATCAGAGCCGAGCTCCAGAAATCTCAGTGCTTAGAGCCGGGGATCTTTCCAGAGAGTCTGCCTTCCTCCAAGTCTTGATTTCCCAGAGGATCTGTAGTCCTGACACGCTTGAGCTTCCCGAGCATTTAAGCAGACATGCCTGTTCTGCTATCAGAGGCATCGCTGCTGCCCGTCTCGCTCTCTCTTACCTGCAACTTTCCCAAACCTGGGGATATTTTACCAAACGTATGACAGTCTTACAGAATCAGATGTTCCTCCGGACGAGAGCTGCCTTAAATACCACTCCATCCTGCTCGTCCCATGCTAGAGTCGATCCCTACGCCTTTGATTTCGCAGCGATAAACATGAGGCCTGCAGCTCGAGGAGAGAAACGGAGATCAGTCTTATCTCTCTGAACAGATCCTCACACAGCAGGTTTATCTAAACGCACAGTTGATTCATCCATCTGTGGTGATTATGATTTTGTCGTCACTCCTGGCTATTCTTTTTAATGCTATCTGTGAATTGAAGCCCACATGAGGTGTTTAGCTGCATGTACGCTGATAAAGCCCATCCGTGCAACATGGCAAGTGTAACTTCTGCCTGCTGACAGCTAACCTGTATTGTGTTGCCAACTGTAATTGATGGAAAAGACTCAAACCACCGTACTCATCAGGAGCCAACTTCAATTTACAACCTGTTAAAAGAAGAAAAGAGTGACTCTCTTTATCTAGAGGACAAGAGTTATTCTTCAGAATAGGCTGCAGGTAACGTGTGCTGATTGGCTGCAGGGTGTATTGGGGCGGTGGAGTGTTTGATTGGACAGAAATCTGTGTAGTGCAGGATGAGTCATCAGGATTTTTGGTCCGTCTTTCCGGAAGAGAAAGAAATTTTTAATGCGTTTGTGTAGTAAAAATGAATTGTATATTATTGTGGTACACTAGCATTTTTTGATACCAACTTACAAATATGAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231469 lncRNA downstream 67004 7355166 ~ 7368728 (-) True G203943
TU231731 lncRNA downstream 107886 7327497 ~ 7327846 (-) True G204192
TU231725 lncRNA downstream 124070 7311449 ~ 7311662 (-) True G204186
TU231721 lncRNA downstream 129138 7305979 ~ 7306594 (-) True G204182
TU231720 lncRNA downstream 132442 7303046 ~ 7303290 (-) True G204181
CI01000047_07389650_07393323.mRNA mRNA downstream 41979 7389143 ~ 7393753 (-) True CI01000047_07389650_07393323
CI01000047_07351900_07353699.mRNA mRNA downstream 81979 7351867 ~ 7353753 (-) True CI01000047_07351900_07353699
CI01000047_07350018_07350608.mRNA mRNA downstream 84888 7349131 ~ 7350844 (-) True CI01000047_07350018_07350608
CI01000047_07137958_07149332.mRNA mRNA downstream 286400 7137384 ~ 7149332 (-) True CI01000047_07137958_07149332
CI01000047_07072890_07079236.mRNA mRNA downstream 356496 7072545 ~ 7079236 (-) True CI01000047_07072890_07079236
CI01000047_07445474_07451503.mRNA mRNA upstream 7140 7444859 ~ 7451503 (-) True CI01000047_07445474_07451503
CI01000047_07453486_07457736.mRNA mRNA upstream 15069 7452788 ~ 7457949 (-) True CI01000047_07453486_07457736
CI01000047_07462130_07463407.mRNA mRNA upstream 24014 7461733 ~ 7463407 (-) True CI01000047_07462130_07463407
CI01000047_07511828_07514793.mRNA mRNA upstream 73236 7510955 ~ 7514793 (-) True CI01000047_07511828_07514793
TU231390 other downstream 1391943 6043253 ~ 6043789 (-) True G203881
TU231342 other downstream 1508388 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 2558998 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 2858767 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 3149051 4278908 ~ 4278976 (-) True G203126

Expression Profile