RNA id: TU230470


Basic Information

Item Value
RNA id TU230470
length 284
lncRNA type read_through
GC content 0.25
exon number 2
gene id G203067
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4004633 ~ 4075704 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAAATGACCAAAACAATCACAATTTTGGTGAAAAACCTGTTGCAAATAAATGTTCTACATGCCTTCTGTTATCTAATTGATAGTTTATACTTTATAATTTATACAAGTAAAAGGCCTTTTAGTATAATTGTAAACGTCCATCCAGCTCATGGTTCATACGTCTTTCTGTTGTAAAAACTTTACTGATTTTTATAAAGTAAATATAAGAATAACTTTTAGATCATTATTAAAACTTAAGTTTGCATTTTATATATATATATATATATATAGATGTGTCTGTTTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230461 lncRNA downstream 49359 3949616 ~ 3955274 (-) True G203059
TU230381 lncRNA downstream 88665 3879083 ~ 3915968 (-) True G202986
TU230446 lncRNA downstream 93848 3880878 ~ 3910785 (-) True G203046
TU230441 lncRNA downstream 97553 3864516 ~ 3907080 (-) True G203041
TU230452 lncRNA downstream 98409 3905622 ~ 3906224 (-) True G203051
TU230316 lncRNA upstream 215 4075919 ~ 4080229 (-) False G202934
TU230318 lncRNA upstream 215 4075919 ~ 4086107 (-) True G202934
TU230490 lncRNA upstream 16005 4091709 ~ 4091935 (-) True G203082
TU230492 lncRNA upstream 17474 4093178 ~ 4093411 (-) True G203084
TU230493 lncRNA upstream 17715 4093419 ~ 4093621 (-) True G203085
CI01000047_03947036_03979744.mRNA mRNA downstream 24308 3946306 ~ 3980325 (-) True CI01000047_03947036_03979744
CI01000047_03873674_03934985.mRNA mRNA downstream 69504 3873459 ~ 3935129 (-) False CI01000047_03873674_03934985
CI01000047_03855710_03868781.mRNA mRNA downstream 134829 3855543 ~ 3869804 (-) True CI01000047_03855710_03868781
CI01000047_03785018_03800982.mRNA mRNA downstream 203629 3784742 ~ 3801004 (-) False CI01000047_03785018_03800982
CI01000047_03741720_03750331.mRNA mRNA downstream 254258 3741070 ~ 3750375 (-) True CI01000047_03741720_03750331
CI01000047_04105620_04111019.mRNA mRNA upstream 29719 4105423 ~ 4111184 (-) True CI01000047_04105620_04111019
CI01000047_04128025_04134725.mRNA mRNA upstream 52198 4127902 ~ 4134725 (-) True CI01000047_04128025_04134725
CI01000047_04137872_04142531.mRNA mRNA upstream 61895 4137599 ~ 4142531 (-) True CI01000047_04137872_04142531
CI01000047_04213574_04213976.mRNA mRNA upstream 137717 4213421 ~ 4213976 (-) False CI01000047_04213574_04213976
CI01000047_04285605_04286644.mRNA mRNA upstream 209523 4285227 ~ 4286694 (-) False CI01000047_04285605_04286644
TU230337 other downstream 18231 3985342 ~ 3986402 (-) True G202944
TU230047 other downstream 870981 3132313 ~ 3133652 (-) False G202733
TU230052 other downstream 870981 3132313 ~ 3133652 (-) True G202733
TU227734 other downstream 2289116 1706068 ~ 1715517 (-) True CI01000047_01708628_01744282
TU227498 other downstream 3170162 833941 ~ 834471 (-) True G200472
TU230541 other upstream 137705 4214294 ~ 4214430 (-) True G203128
TU230539 other upstream 203204 4278908 ~ 4278976 (-) True G203126
TU230543 other upstream 498631 4576786 ~ 4576965 (-) True G203130
TU230719 other upstream 798675 4874379 ~ 4876734 (-) True G203286
TU231342 other upstream 1842804 5918508 ~ 5927344 (-) True G203840

Expression Profile