RNA id: TU230636


Basic Information

Item Value
RNA id TU230636
length 230
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G203217
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4536341 ~ 4536570 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTAAGTCTTCTGAAATCATACGATAGTTTTGTGTGAGGAACAAACTAAAGTTGAAGTTTTTTTTTTTTTTTTTCATTCTCTAGGCTAATCTTGCCAGCCACTAATATGGTGGCTTTAGATTTAAAATGACTTCAGAGCATACAAGTCACGAAATTCAAACAAATATTTATTTTAGGATGAACTATCCCTTTAAGAAAAACTGTTTCATTAGATGTGAGGTCTGCTGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230623 lncRNA downstream 33819 4502205 ~ 4502522 (-) True G203204
TU230610 lncRNA downstream 110982 4420159 ~ 4425359 (-) True G203191
TU230607 lncRNA downstream 127514 4408541 ~ 4408827 (-) True G203189
TU230606 lncRNA downstream 127576 4408473 ~ 4408765 (-) False G203189
TU230605 lncRNA downstream 127576 4408541 ~ 4408765 (-) False G203189
TU230641 lncRNA upstream 8999 4545569 ~ 4546132 (-) False G203219
TU230638 lncRNA upstream 9166 4545736 ~ 4546132 (-) False G203219
TU230642 lncRNA upstream 9166 4545736 ~ 4546216 (-) False G203219
TU230639 lncRNA upstream 9363 4545933 ~ 4546132 (-) False G203219
TU230640 lncRNA upstream 9363 4545933 ~ 4546216 (-) True G203219
CI01000047_04479638_04501854.mRNA mRNA downstream 34368 4479241 ~ 4501973 (-) True CI01000047_04479638_04501854
CI01000047_04458864_04461672.mRNA mRNA downstream 74247 4458771 ~ 4462094 (-) True CI01000047_04458864_04461672
CI01000047_04398951_04431817.mRNA mRNA downstream 104524 4398951 ~ 4431817 (-) True CI01000047_04398951_04431817
CI01000047_04385029_04397861.mRNA mRNA downstream 138480 4384547 ~ 4397861 (-) True CI01000047_04385029_04397861
CI01000047_04345335_04375341.mRNA mRNA downstream 160907 4345127 ~ 4375434 (-) True CI01000047_04345335_04375341
CI01000047_04555399_04568166.mRNA mRNA upstream 18252 4554822 ~ 4568320 (-) True CI01000047_04555399_04568166
CI01000047_04575184_04576337.mRNA mRNA upstream 38421 4574991 ~ 4576337 (-) False CI01000047_04575184_04576337
CI01000047_04589853_04594533.mRNA mRNA upstream 53200 4589770 ~ 4594636 (-) True CI01000047_04589853_04594533
CI01000047_04596548_04605172.mRNA mRNA upstream 59410 4595980 ~ 4605172 (-) True CI01000047_04596548_04605172
CI01000047_04613815_04652751.mRNA mRNA upstream 77245 4613815 ~ 4652751 (-) True CI01000047_04613815_04652751
TU230539 other downstream 249660 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 321911 4214294 ~ 4214430 (-) True G203128
TU230337 other downstream 549939 3985342 ~ 3986402 (-) True G202944
TU230047 other downstream 1402689 3132313 ~ 3133652 (-) False G202733
TU230543 other upstream 37765 4576786 ~ 4576965 (-) True G203130
TU230719 other upstream 337809 4874379 ~ 4876734 (-) True G203286
TU231342 other upstream 1381938 5918508 ~ 5927344 (-) True G203840
TU231390 other upstream 1506683 6043253 ~ 6043789 (-) True G203881

Expression Profile