RNA id: TU230644



Basic Information


Item Value
RNA id TU230644
length 238
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G203221
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4550020 ~ 4550257 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTAGAATAAGTTGACATGTATTTGTAAAATTACTTATAGTCAGTAGAAAGTCTGTTGGGGAGCATCAAAATAAAGTGTTAGCAGATATTAAAGGAACATTTCAGATATTAAAAGAAAATTTCTGTCATTAATTACTCACCCTCATGTCATTCCAAACCCATAAGACCTTTGTTCATCTTCTGAACAAAAATTAAGATATTTTTGATGAAATCCGAGGGTTTCTGAACCACACAGGCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230642 lncRNA downstream 3804 4545736 ~ 4546216 (-) False G203219
TU230640 lncRNA downstream 3804 4545933 ~ 4546216 (-) True G203219
TU230641 lncRNA downstream 3888 4545569 ~ 4546132 (-) False G203219
TU230638 lncRNA downstream 3888 4545736 ~ 4546132 (-) False G203219
TU230639 lncRNA downstream 3888 4545933 ~ 4546132 (-) False G203219
TU230686 lncRNA upstream 251640 4801897 ~ 4802226 (-) True G203258
TU230732 lncRNA upstream 332396 4882653 ~ 4882903 (-) True G203298
TU230758 lncRNA upstream 385249 4935506 ~ 4948267 (-) True G203323
TU230737 lncRNA upstream 424039 4974296 ~ 4978735 (-) True G203303
TU230792 lncRNA upstream 438900 4989157 ~ 4989456 (-) True G203355
CI01000047_04479638_04501854.mRNA mRNA downstream 48047 4479241 ~ 4501973 (-) True CI01000047_04479638_04501854
CI01000047_04458864_04461672.mRNA mRNA downstream 87926 4458771 ~ 4462094 (-) True CI01000047_04458864_04461672
CI01000047_04398951_04431817.mRNA mRNA downstream 118203 4398951 ~ 4431817 (-) True CI01000047_04398951_04431817
CI01000047_04385029_04397861.mRNA mRNA downstream 152159 4384547 ~ 4397861 (-) True CI01000047_04385029_04397861
CI01000047_04345335_04375341.mRNA mRNA downstream 174586 4345127 ~ 4375434 (-) True CI01000047_04345335_04375341
CI01000047_04555399_04568166.mRNA mRNA upstream 4565 4554822 ~ 4568320 (-) True CI01000047_04555399_04568166
CI01000047_04575184_04576337.mRNA mRNA upstream 24734 4574991 ~ 4576337 (-) False CI01000047_04575184_04576337
CI01000047_04589853_04594533.mRNA mRNA upstream 39513 4589770 ~ 4594636 (-) True CI01000047_04589853_04594533
CI01000047_04596548_04605172.mRNA mRNA upstream 45723 4595980 ~ 4605172 (-) True CI01000047_04596548_04605172
CI01000047_04613815_04652751.mRNA mRNA upstream 63558 4613815 ~ 4652751 (-) True CI01000047_04613815_04652751
TU230539 other downstream 263339 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 335590 4214294 ~ 4214430 (-) True G203128
TU230337 other downstream 563618 3985342 ~ 3986402 (-) True G202944
TU230047 other downstream 1416368 3132313 ~ 3133652 (-) False G202733
TU230543 other upstream 24078 4576786 ~ 4576965 (-) True G203130
TU230719 other upstream 324122 4874379 ~ 4876734 (-) True G203286
TU231342 other upstream 1368251 5918508 ~ 5927344 (-) True G203840
TU231390 other upstream 1492996 6043253 ~ 6043789 (-) True G203881

Expression Profile