RNA id: TU230758



Basic Information


Item Value
RNA id TU230758
length 308
lncRNA type inter_gene
GC content 0.31
exon number 3
gene id G203323
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 4935506 ~ 4948267 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TAAAATATAAAACCAGAATTGTGTGATATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGCGTGATATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGCGAGTTATAAAGTCAGAATTGTGAGATATAAACTCAGAATTGCGAGTTATAAAGTCAGAATTGTGAGATATAAAGTCAGAATTGTGTGTTATAAAGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230732 lncRNA downstream 52603 4882653 ~ 4882903 (-) True G203298
TU230686 lncRNA downstream 133280 4801897 ~ 4802226 (-) True G203258
TU230644 lncRNA downstream 385249 4550020 ~ 4550257 (-) True G203221
TU230642 lncRNA downstream 389290 4545736 ~ 4546216 (-) False G203219
TU230737 lncRNA upstream 26029 4974296 ~ 4978735 (-) True G203303
TU230792 lncRNA upstream 40890 4989157 ~ 4989456 (-) True G203355
TU230793 lncRNA upstream 42493 4990760 ~ 4990990 (-) True G203356
TU230796 lncRNA upstream 56205 5004472 ~ 5004977 (-) True G203359
TU230884 lncRNA upstream 147819 5096086 ~ 5096681 (-) True G203437
CI01000047_04840115_04844233.mRNA mRNA downstream 91273 4839563 ~ 4844233 (-) True CI01000047_04840115_04844233
CI01000047_04790377_04795864.mRNA mRNA downstream 139190 4790224 ~ 4796316 (-) True CI01000047_04790377_04795864
CI01000047_04703391_04706693.mRNA mRNA downstream 228813 4703038 ~ 4706693 (-) True CI01000047_04703391_04706693
CI01000047_04613815_04652751.mRNA mRNA downstream 282755 4613815 ~ 4652751 (-) True CI01000047_04613815_04652751
CI01000047_04596548_04605172.mRNA mRNA downstream 330334 4595980 ~ 4605172 (-) True CI01000047_04596548_04605172
CI01000047_05108733_05109209.mRNA mRNA upstream 159737 5108004 ~ 5109256 (-) True CI01000047_05108733_05109209
CI01000047_05151314_05157285.mRNA mRNA upstream 201452 5149719 ~ 5158394 (-) True CI01000047_05151314_05157285
CI01000047_05219313_05222967.mRNA mRNA upstream 270923 5219190 ~ 5222990 (-) True CI01000047_05219313_05222967
CI01000047_05235089_05236228.mRNA mRNA upstream 285877 5234144 ~ 5236273 (-) True CI01000047_05235089_05236228
CI01000047_05247473_05248489.mRNA mRNA upstream 298696 5246963 ~ 5248681 (-) True CI01000047_05247473_05248489
TU230719 other downstream 58772 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 358541 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 648825 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 721076 4214294 ~ 4214430 (-) True G203128
TU230337 other downstream 949104 3985342 ~ 3986402 (-) True G202944
TU231342 other upstream 970241 5918508 ~ 5927344 (-) True G203840
TU231390 other upstream 1094986 6043253 ~ 6043789 (-) True G203881

Expression Profile