RNA id: TU231053



Basic Information


Item Value
RNA id TU231053
length 240
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G203576
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5393098 ~ 5393337 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTACTTTTGATCAATTTAATGCATGCTTGCTGAAAACAAATATTAATTTCTTTAATTTCTTTCCAAACAAACAAACAAAAAAACTCTTACTGACCCCAAACTTTTGAACGGTAGTGATAATGTTACAAAAACTTTCTATTTCAGATAAATGCTGTTCTTTTGAACTTTCTATTCATCAAATAATCCTGAAAAAAAATTACACAACTGTTTTCAACACTGATAATAATCATAAATGTTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231051 lncRNA downstream 2086 5390722 ~ 5391012 (-) True G203574
TU230862 lncRNA downstream 5055 5387092 ~ 5388043 (-) True G203417
TU230992 lncRNA downstream 75434 5295470 ~ 5317664 (-) False G203516
TU230993 lncRNA downstream 78794 5295470 ~ 5314304 (-) True G203516
TU230876 lncRNA downstream 228229 5121926 ~ 5164869 (-) True G203429
TU231188 lncRNA upstream 245106 5638443 ~ 5638653 (-) True G203709
TU231191 lncRNA upstream 249408 5642745 ~ 5642967 (-) True G203712
TU231192 lncRNA upstream 250998 5644335 ~ 5644537 (-) True G203713
TU231198 lncRNA upstream 259408 5652745 ~ 5652958 (-) True G203719
TU231199 lncRNA upstream 259680 5653017 ~ 5654088 (-) True G203720
CI01000047_05247473_05248489.mRNA mRNA downstream 144417 5246963 ~ 5248681 (-) True CI01000047_05247473_05248489
CI01000047_05235089_05236228.mRNA mRNA downstream 156825 5234144 ~ 5236273 (-) True CI01000047_05235089_05236228
CI01000047_05219313_05222967.mRNA mRNA downstream 170108 5219190 ~ 5222990 (-) True CI01000047_05219313_05222967
CI01000047_05151314_05157285.mRNA mRNA downstream 234704 5149719 ~ 5158394 (-) True CI01000047_05151314_05157285
CI01000047_05108733_05109209.mRNA mRNA downstream 283842 5108004 ~ 5109256 (-) True CI01000047_05108733_05109209
CI01000047_05546059_05547988.mRNA mRNA upstream 151444 5544781 ~ 5548356 (-) True CI01000047_05546059_05547988
CI01000047_05805272_05807974.mRNA mRNA upstream 411935 5805272 ~ 5807974 (-) True CI01000047_05805272_05807974
CI01000047_05862382_05868129.mRNA mRNA upstream 468488 5861825 ~ 5868679 (-) True CI01000047_05862382_05868129
CI01000047_05869347_05869519.mRNA mRNA upstream 475947 5869284 ~ 5869519 (-) True CI01000047_05869347_05869519
CI01000047_05958264_05971163.mRNA mRNA upstream 564554 5957891 ~ 5971163 (-) True CI01000047_05958264_05971163
TU230719 other downstream 516364 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 816133 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 1106417 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 1178668 4214294 ~ 4214430 (-) True G203128
TU230337 other downstream 1406696 3985342 ~ 3986402 (-) True G202944
TU231342 other upstream 525171 5918508 ~ 5927344 (-) True G203840
TU231390 other upstream 649916 6043253 ~ 6043789 (-) True G203881

Expression Profile