RNA id: TU231362


Basic Information

Item Value
RNA id TU231362
length 318
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G203857
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5980800 ~ 5981561 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGTAATTACAGTTATAACTTGTATTGTCTTCTTGTTTTTATCCACTATATCAGTATCCAGTGTGAAATGATTCGCGCAGACATAAACGAATTTCGCTAGAATTGAGGGAGCATTTTCTTGGAAAACAAAATGAATCCACCTCGTCTTCAGCGACTCAGATTTCGGGAGTAAATGGAGAGAGCTATGTGGATTAATCCATCCAGCTACAGAACACCTAAAACTCTTGGGAGACATTCTCGTCAGTGCAGCAATGGTGGACCGCGTACAACACGCTGTGAACTCGCTCAGGGCGGTTCTATGTTAAAACGGCAGTGTCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231358 lncRNA downstream 4544 5975910 ~ 5976256 (-) True G203853
TU231237 lncRNA downstream 27512 5750801 ~ 5953288 (-) True G203752
TU231249 lncRNA downstream 176642 5803136 ~ 5804158 (-) True G203764
TU231199 lncRNA downstream 326712 5653017 ~ 5654088 (-) True G203720
TU231198 lncRNA downstream 327842 5652745 ~ 5652958 (-) True G203719
TU231363 lncRNA upstream 1183 5982744 ~ 5983064 (-) True G203858
TU231364 lncRNA upstream 3020 5984581 ~ 5984887 (-) True G203859
TU231369 lncRNA upstream 10216 5991777 ~ 5992089 (-) True G203861
TU231385 lncRNA upstream 48028 6029589 ~ 6029905 (-) True G203876
TU231387 lncRNA upstream 53475 6035036 ~ 6035320 (-) True G203878
CI01000047_05958264_05971163.mRNA mRNA downstream 9637 5957891 ~ 5971163 (-) True CI01000047_05958264_05971163
CI01000047_05869347_05869519.mRNA mRNA downstream 111281 5869284 ~ 5869519 (-) True CI01000047_05869347_05869519
CI01000047_05862382_05868129.mRNA mRNA downstream 112121 5861825 ~ 5868679 (-) True CI01000047_05862382_05868129
CI01000047_05805272_05807974.mRNA mRNA downstream 172826 5805272 ~ 5807974 (-) True CI01000047_05805272_05807974
CI01000047_05546059_05547988.mRNA mRNA downstream 432444 5544781 ~ 5548356 (-) True CI01000047_05546059_05547988
CI01000047_06139714_06142702.mRNA mRNA upstream 158056 6139617 ~ 6142702 (-) True CI01000047_06139714_06142702
CI01000047_06184569_06194319.mRNA mRNA upstream 202511 6184072 ~ 6195664 (-) True CI01000047_06184569_06194319
CI01000047_06216778_06234561.mRNA mRNA upstream 234065 6215626 ~ 6235272 (-) True CI01000047_06216778_06234561
CI01000047_06242992_06270894.mRNA mRNA upstream 261166 6242727 ~ 6272791 (-) True CI01000047_06242992_06270894
CI01000047_06302441_06309359.mRNA mRNA upstream 320880 6302441 ~ 6309359 (-) True CI01000047_06302441_06309359
TU231342 other downstream 53456 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 1104066 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 1403835 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 1694119 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 1766370 4214294 ~ 4214430 (-) True G203128
TU231390 other upstream 61692 6043253 ~ 6043789 (-) True G203881

Expression Profile