RNA id: TU231363


Basic Information

Item Value
RNA id TU231363
length 321
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G203858
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5982744 ~ 5983064 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTAGAAGTAAAAATGAAACATTTAGAAGTAATTCAAGTGTAATCGACCAGTCTCTGTTCTCCTGTTTCCACCGTAACGGCGCTGGATCTCGTGCCGGAGATGACTCGCGTTCGGCGGGGGAACTGATAACTTCAGACCACCGCCTGCGTTTCACTCATAGCCGAAAAATGCTGTGACTGACTCCATAACCTGTCCATAAATAATCAGTGTACGATTCTGAGAACATATTTTAACATCCTAAGTATTTATATTCTATATCTTTTTGAATAAAATCATAACATTTTATGCAAGGCATCAGGCGTTTCCATCACGTGAAAAGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231362 lncRNA downstream 1183 5980800 ~ 5981561 (-) True G203857
TU231358 lncRNA downstream 6488 5975910 ~ 5976256 (-) True G203853
TU231237 lncRNA downstream 29456 5750801 ~ 5953288 (-) True G203752
TU231249 lncRNA downstream 178586 5803136 ~ 5804158 (-) True G203764
TU231199 lncRNA downstream 328656 5653017 ~ 5654088 (-) True G203720
TU231364 lncRNA upstream 1517 5984581 ~ 5984887 (-) True G203859
TU231369 lncRNA upstream 8713 5991777 ~ 5992089 (-) True G203861
TU231385 lncRNA upstream 46525 6029589 ~ 6029905 (-) True G203876
TU231387 lncRNA upstream 51972 6035036 ~ 6035320 (-) True G203878
TU231394 lncRNA upstream 72405 6055469 ~ 6056471 (-) True G203884
CI01000047_05958264_05971163.mRNA mRNA downstream 11581 5957891 ~ 5971163 (-) True CI01000047_05958264_05971163
CI01000047_05869347_05869519.mRNA mRNA downstream 113225 5869284 ~ 5869519 (-) True CI01000047_05869347_05869519
CI01000047_05862382_05868129.mRNA mRNA downstream 114065 5861825 ~ 5868679 (-) True CI01000047_05862382_05868129
CI01000047_05805272_05807974.mRNA mRNA downstream 174770 5805272 ~ 5807974 (-) True CI01000047_05805272_05807974
CI01000047_05546059_05547988.mRNA mRNA downstream 434388 5544781 ~ 5548356 (-) True CI01000047_05546059_05547988
CI01000047_06139714_06142702.mRNA mRNA upstream 156553 6139617 ~ 6142702 (-) True CI01000047_06139714_06142702
CI01000047_06184569_06194319.mRNA mRNA upstream 201008 6184072 ~ 6195664 (-) True CI01000047_06184569_06194319
CI01000047_06216778_06234561.mRNA mRNA upstream 232562 6215626 ~ 6235272 (-) True CI01000047_06216778_06234561
CI01000047_06242992_06270894.mRNA mRNA upstream 259663 6242727 ~ 6272791 (-) True CI01000047_06242992_06270894
CI01000047_06302441_06309359.mRNA mRNA upstream 319377 6302441 ~ 6309359 (-) True CI01000047_06302441_06309359
TU231342 other downstream 55400 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 1106010 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 1405779 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 1696063 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 1768314 4214294 ~ 4214430 (-) True G203128
TU231390 other upstream 60189 6043253 ~ 6043789 (-) True G203881

Expression Profile