RNA id: TU231390


Basic Information

Item Value
RNA id TU231390
length 537
RNA type TUCP
GC content 0.46
exon number 1
gene id G203881
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6043253 ~ 6043789 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AACAAAAACTGCCCGACGGCCGACCGTCGCCTTGGTGTGTTCCTGCCTTTAGAGAGGCAGAGTCTCTCAGAAGTAAAGATGGGCAGAGGCTCTCCAATCTGTGAAAGAGTGCATAAAAAGATTGTGGAATACTTTAAAAACAATGTTCCTCAACGTCAAATTGCAAAGCCTTTGCAAATCTCATCATCTACAGTGCATAACATCATCAAAAGTTTCAGAGAAACTGGAGAAATATCTGTGCGTAAGGGACAAGGCCGAAGACCTTTATTGGATGCCCGTGGTCTTCGGGCCCTCAGACGACACTGCATCACTCATCGGCATGATTGTGTCAATGACATTACTAAATGGGCCCAGGAATACTTCCAGAAACCACTGTCGGAAAACACAATCCGCCGTGCCATCTGCAGATGCCAACTAAAGCTCTATCATGCAAAAAGGAAGCCATATGTGAACATGGTCCAGAAGCGCCGTCGTGTCCTGTGGGCCAAGGCTCATTTAAAATGGACTGTTTCAAAGTGGAAAAGTGTTCTATGGTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231387 lncRNA downstream 7933 6035036 ~ 6035320 (-) True G203878
TU231385 lncRNA downstream 13348 6029589 ~ 6029905 (-) True G203876
TU231369 lncRNA downstream 51164 5991777 ~ 5992089 (-) True G203861
TU231364 lncRNA downstream 58366 5984581 ~ 5984887 (-) True G203859
TU231363 lncRNA downstream 60189 5982744 ~ 5983064 (-) True G203858
TU231394 lncRNA upstream 11680 6055469 ~ 6056471 (-) True G203884
TU231398 lncRNA upstream 17741 6061530 ~ 6061952 (-) True G203888
TU231360 lncRNA upstream 90928 6134717 ~ 6137099 (-) True G203855
TU231536 lncRNA upstream 301445 6345234 ~ 6345473 (-) True G204005
TU231541 lncRNA upstream 322586 6366375 ~ 6366652 (-) True G204010
CI01000047_05958264_05971163.mRNA mRNA downstream 72090 5957891 ~ 5971163 (-) True CI01000047_05958264_05971163
CI01000047_05869347_05869519.mRNA mRNA downstream 173734 5869284 ~ 5869519 (-) True CI01000047_05869347_05869519
CI01000047_05862382_05868129.mRNA mRNA downstream 174574 5861825 ~ 5868679 (-) True CI01000047_05862382_05868129
CI01000047_05805272_05807974.mRNA mRNA downstream 235279 5805272 ~ 5807974 (-) True CI01000047_05805272_05807974
CI01000047_05546059_05547988.mRNA mRNA downstream 494897 5544781 ~ 5548356 (-) True CI01000047_05546059_05547988
CI01000047_06139714_06142702.mRNA mRNA upstream 95828 6139617 ~ 6142702 (-) True CI01000047_06139714_06142702
CI01000047_06184569_06194319.mRNA mRNA upstream 140283 6184072 ~ 6195664 (-) True CI01000047_06184569_06194319
CI01000047_06216778_06234561.mRNA mRNA upstream 171837 6215626 ~ 6235272 (-) True CI01000047_06216778_06234561
CI01000047_06242992_06270894.mRNA mRNA upstream 198938 6242727 ~ 6272791 (-) True CI01000047_06242992_06270894
CI01000047_06302441_06309359.mRNA mRNA upstream 258652 6302441 ~ 6309359 (-) True CI01000047_06302441_06309359
TU231342 other downstream 115909 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 1166519 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 1466288 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 1756572 4278908 ~ 4278976 (-) True G203126
TU230541 other downstream 1828823 4214294 ~ 4214430 (-) True G203128

Expression Profile