RNA id: TU231541


Basic Information

Item Value
RNA id TU231541
length 278
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G204010
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6366375 ~ 6366652 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTATGGCAATATCAGCTGCTTTGTTTAAAAAAAAACATACATTAAAGCTGAAATCCAACCTGAATGATGACAACACAGAATAAAATACTATCACTAGTGATCATCAAATCCTTTTTACAGTTTATTTTACACACTTTGTGTTTAAGTCTTCCACTTTTTTCACAAAACCTTCGCTCTCTAAAAACCCAGTCAGTTTGGGTTAAAATTCTTTAAAAGGCTTATAAACATTGAATTATTACCAACATATGAAATTAAATTAAGGACATGCATCAGAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231536 lncRNA downstream 20902 6345234 ~ 6345473 (-) True G204005
TU231360 lncRNA downstream 229276 6134717 ~ 6137099 (-) True G203855
TU231398 lncRNA downstream 304423 6061530 ~ 6061952 (-) True G203888
TU231394 lncRNA downstream 309904 6055469 ~ 6056471 (-) True G203884
TU231387 lncRNA downstream 331055 6035036 ~ 6035320 (-) True G203878
TU231543 lncRNA upstream 7967 6374619 ~ 6414242 (-) True G204012
TU231563 lncRNA upstream 97788 6464440 ~ 6466219 (-) True G204031
TU231468 lncRNA upstream 173373 6540025 ~ 6546064 (-) True G203942
TU231489 lncRNA upstream 183538 6550190 ~ 6552171 (-) True G203963
TU231472 lncRNA upstream 202345 6568997 ~ 6573581 (-) True G203946
CI01000047_06337531_06343900.mRNA mRNA downstream 22361 6337093 ~ 6344014 (-) True CI01000047_06337531_06343900
CI01000047_06327240_06328630.mRNA mRNA downstream 37745 6326771 ~ 6328630 (-) True CI01000047_06327240_06328630
CI01000047_06312165_06320684.mRNA mRNA downstream 44875 6311168 ~ 6321500 (-) True CI01000047_06312165_06320684
CI01000047_06302441_06309359.mRNA mRNA downstream 57016 6302441 ~ 6309359 (-) True CI01000047_06302441_06309359
CI01000047_06242992_06270894.mRNA mRNA downstream 93584 6242727 ~ 6272791 (-) True CI01000047_06242992_06270894
CI01000047_06436919_06455480.mRNA mRNA upstream 69695 6436347 ~ 6455817 (-) True CI01000047_06436919_06455480
CI01000047_06487774_06496807.mRNA mRNA upstream 121063 6487715 ~ 6496807 (-) True CI01000047_06487774_06496807
CI01000047_06574147_06577660.mRNA mRNA upstream 207396 6574048 ~ 6577979 (-) True CI01000047_06574147_06577660
CI01000047_06587350_06593162.mRNA mRNA upstream 220438 6587090 ~ 6593162 (-) True CI01000047_06587350_06593162
CI01000047_06644025_06659494.mRNA mRNA upstream 277098 6643750 ~ 6659694 (-) True CI01000047_06644025_06659494
TU231390 other downstream 322586 6043253 ~ 6043789 (-) True G203881
TU231342 other downstream 439031 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 1489641 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 1789410 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 2079694 4278908 ~ 4278976 (-) True G203126

Expression Profile