RNA id: TU231633



Basic Information


Item Value
RNA id TU231633
length 200
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G204097
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 6851639 ~ 6851838 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CATTTGCAAACAGACGAGCATGTCTGAGGCTGGAATGCAGAACGACCGCTCTTTCTTTACACCCGTTCCTGAAATAATTCAGTGCGTCATGAAGAAAGACTAAGGTGTGAGCCGGTGACATCATCACCATCCGGGAGGAGCCGAGTTTGTTGTGGGTTCAAGTGTTTATTGTTGCTGCGCGACGGCTTTCACATCACAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231631 lncRNA downstream 1507 6849702 ~ 6850132 (-) True G204095
TU231436 lncRNA downstream 78142 6748168 ~ 6773497 (-) True G203919
TU231456 lncRNA downstream 94906 6753789 ~ 6756733 (-) True G203930
TU231446 lncRNA downstream 100048 6706669 ~ 6751591 (-) True G203924
TU231602 lncRNA downstream 142816 6708108 ~ 6708823 (-) True G204069
TU231634 lncRNA upstream 765 6852603 ~ 6852803 (-) True G204098
TU231665 lncRNA upstream 40996 6892834 ~ 6893180 (-) True G204129
TU231473 lncRNA upstream 44163 6896001 ~ 6898152 (-) True G203947
TU231675 lncRNA upstream 166285 7018123 ~ 7018330 (-) True G204139
TU231685 lncRNA upstream 211368 7063206 ~ 7063431 (-) True G204149
CI01000047_06843638_06844618.mRNA mRNA downstream 7021 6843370 ~ 6844618 (-) True CI01000047_06843638_06844618
CI01000047_06667661_06692521.mRNA mRNA downstream 159118 6667220 ~ 6692521 (-) True CI01000047_06667661_06692521
CI01000047_06660338_06666635.mRNA mRNA downstream 185004 6660300 ~ 6666635 (-) True CI01000047_06660338_06666635
CI01000047_06644025_06659494.mRNA mRNA downstream 191945 6643750 ~ 6659694 (-) True CI01000047_06644025_06659494
CI01000047_06587350_06593162.mRNA mRNA downstream 258477 6587090 ~ 6593162 (-) True CI01000047_06587350_06593162
CI01000047_06900704_06954882.mRNA mRNA upstream 48866 6900704 ~ 6954882 (-) True CI01000047_06900704_06954882
CI01000047_06958499_06967108.mRNA mRNA upstream 106145 6957983 ~ 6967834 (-) True CI01000047_06958499_06967108
CI01000047_06968741_06972782.mRNA mRNA upstream 116486 6968324 ~ 6972850 (-) True CI01000047_06968741_06972782
CI01000047_06978552_06982232.mRNA mRNA upstream 126610 6978448 ~ 6982542 (-) True CI01000047_06978552_06982232
CI01000047_06993737_07007548.mRNA mRNA upstream 141884 6993722 ~ 7007548 (-) True CI01000047_06993737_07007548
TU231390 other downstream 807850 6043253 ~ 6043789 (-) True G203881
TU231342 other downstream 924295 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 1974905 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 2274674 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 2564958 4278908 ~ 4278976 (-) True G203126

Expression Profile