RNA id: TU231714


Basic Information

Item Value
RNA id TU231714
length 299
lncRNA type antisense_over
GC content 0.55
exon number 1
gene id G204175
representative True

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7296540 ~ 7296838 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGACATCCAACACGGACTGCTTGACAAATTTATCAAAGTCCATGTCCCTTTTCCGTGGCACATCGAGCGCCGGGAAGAGGTCCTGACGAGGCCCTTGAAGACAGGCATGTCATCGATCACCATCTCAAGGCTCTCATCAGCACCTGGTCCTCTGGTCTGCGCGGATCTCCTCTCTTCAGGGAATCGGCCACGACCAGCACTGACCTAACAGCCCGCAGAGCCCAGTGATCCTGTGACGGTGAGACTGAGAGAGTCCAATCAACTACTGCAGGCCAAACGCGGTCACACACTGTTTAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231706 lncRNA downstream 11113 7284539 ~ 7285427 (-) True G204167
TU231461 lncRNA downstream 168471 7120453 ~ 7128069 (-) True G203935
TU231685 lncRNA downstream 233109 7063206 ~ 7063431 (-) True G204149
TU231675 lncRNA downstream 278210 7018123 ~ 7018330 (-) True G204139
TU231473 lncRNA downstream 398388 6896001 ~ 6898152 (-) True G203947
TU231716 lncRNA upstream 1488 7298326 ~ 7298553 (-) True G204177
TU231720 lncRNA upstream 6208 7303046 ~ 7303290 (-) True G204181
TU231721 lncRNA upstream 9141 7305979 ~ 7306594 (-) True G204182
TU231725 lncRNA upstream 14611 7311449 ~ 7311662 (-) True G204186
TU231731 lncRNA upstream 30659 7327497 ~ 7327846 (-) True G204192
CI01000047_07137958_07149332.mRNA mRNA downstream 147208 7137384 ~ 7149332 (-) True CI01000047_07137958_07149332
CI01000047_07072890_07079236.mRNA mRNA downstream 217304 7072545 ~ 7079236 (-) True CI01000047_07072890_07079236
CI01000047_07010651_07017023.mRNA mRNA downstream 279517 7010529 ~ 7017023 (-) True CI01000047_07010651_07017023
CI01000047_06993737_07007548.mRNA mRNA downstream 288992 6993722 ~ 7007548 (-) True CI01000047_06993737_07007548
CI01000047_06978552_06982232.mRNA mRNA downstream 313998 6978448 ~ 6982542 (-) True CI01000047_06978552_06982232
CI01000047_07350018_07350608.mRNA mRNA upstream 52293 7349131 ~ 7350844 (-) True CI01000047_07350018_07350608
CI01000047_07351900_07353699.mRNA mRNA upstream 55029 7351867 ~ 7353753 (-) True CI01000047_07351900_07353699
CI01000047_07389650_07393323.mRNA mRNA upstream 92305 7389143 ~ 7393753 (-) True CI01000047_07389650_07393323
CI01000047_07436294_07437420.mRNA mRNA upstream 138894 7435732 ~ 7437719 (-) True CI01000047_07436294_07437420
CI01000047_07445474_07451503.mRNA mRNA upstream 148021 7444859 ~ 7451503 (-) True CI01000047_07445474_07451503
TU231390 other downstream 1252751 6043253 ~ 6043789 (-) True G203881
TU231342 other downstream 1369196 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 2419806 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 2719575 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 3009859 4278908 ~ 4278976 (-) True G203126

Expression Profile