RNA id: TU231720



Basic Information


Item Value
RNA id TU231720
length 245
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G204181
representative True

Chromosome Information


Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 7303046 ~ 7303290 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AACAGATTGCAAAAAGACAGGGACGGCACAAAAACAGCTGACGCCCGGAGAAAAGAGCCATGGGTGTTTGCTTTAGATCACAAAGATCTGTCAATGTCCAGAAGCCAGTGAAGTTGCACTTCTGCTTTCAGGGTCAAATGTAAGGAGGGAAACGCACACAAACACACCCTGAACACGGCTGACGTGCTGCAGCAGTTGAAGGAGACGTTCTTGATGGCGTATTTCTCTGGGTCCGAGGAGCCGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231716 lncRNA downstream 4493 7298326 ~ 7298553 (-) True G204177
TU231714 lncRNA downstream 6208 7296540 ~ 7296838 (-) True G204175
TU231706 lncRNA downstream 17619 7284539 ~ 7285427 (-) True G204167
TU231461 lncRNA downstream 174977 7120453 ~ 7128069 (-) True G203935
TU231685 lncRNA downstream 239615 7063206 ~ 7063431 (-) True G204149
TU231721 lncRNA upstream 2689 7305979 ~ 7306594 (-) True G204182
TU231725 lncRNA upstream 8159 7311449 ~ 7311662 (-) True G204186
TU231731 lncRNA upstream 24207 7327497 ~ 7327846 (-) True G204192
TU231469 lncRNA upstream 51876 7355166 ~ 7368728 (-) True G203943
CI01000047_07137958_07149332.mRNA mRNA downstream 153714 7137384 ~ 7149332 (-) True CI01000047_07137958_07149332
CI01000047_07072890_07079236.mRNA mRNA downstream 223810 7072545 ~ 7079236 (-) True CI01000047_07072890_07079236
CI01000047_07010651_07017023.mRNA mRNA downstream 286023 7010529 ~ 7017023 (-) True CI01000047_07010651_07017023
CI01000047_06993737_07007548.mRNA mRNA downstream 295498 6993722 ~ 7007548 (-) True CI01000047_06993737_07007548
CI01000047_06978552_06982232.mRNA mRNA downstream 320504 6978448 ~ 6982542 (-) True CI01000047_06978552_06982232
CI01000047_07350018_07350608.mRNA mRNA upstream 45841 7349131 ~ 7350844 (-) True CI01000047_07350018_07350608
CI01000047_07351900_07353699.mRNA mRNA upstream 48577 7351867 ~ 7353753 (-) True CI01000047_07351900_07353699
CI01000047_07389650_07393323.mRNA mRNA upstream 85853 7389143 ~ 7393753 (-) True CI01000047_07389650_07393323
CI01000047_07436294_07437420.mRNA mRNA upstream 132442 7435732 ~ 7437719 (-) True CI01000047_07436294_07437420
CI01000047_07445474_07451503.mRNA mRNA upstream 141569 7444859 ~ 7451503 (-) True CI01000047_07445474_07451503
TU231390 other downstream 1259257 6043253 ~ 6043789 (-) True G203881
TU231342 other downstream 1375702 5918508 ~ 5927344 (-) True G203840
TU230719 other downstream 2426312 4874379 ~ 4876734 (-) True G203286
TU230543 other downstream 2726081 4576786 ~ 4576965 (-) True G203130
TU230539 other downstream 3016365 4278908 ~ 4278976 (-) True G203126

Expression Profile