RNA id: TU233531


Basic Information

Item Value
RNA id TU233531
length 242
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G205730
representative True

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 588140 ~ 588381 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTGTCTATTCCAAGTCATCTCCAAGTCTTTCTGTGTTAATTTCTCTATTGAACCAAGCAGTAAAAAAGAGATTTGTTCCTATCAGTAATATCCACAAAAGAGTTCTGTGTGTGGTGAAAAATTGTGAATGTAACAACTTCCAAGCAAGAAGAGCCTTCTGCTGAAAATTAGATATTATAACCGGCAGCTTATTAGGAATATTATCACTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233458 lncRNA downstream 125158 462538 ~ 462982 (-) True G205659
TU233457 lncRNA downstream 125850 461988 ~ 462290 (-) True G205658
TU233449 lncRNA downstream 129553 439336 ~ 458587 (-) False G205650
TU233448 lncRNA downstream 129553 456294 ~ 458587 (-) True G205650
TU233452 lncRNA downstream 149028 438802 ~ 439112 (-) True G205653
TU234732 lncRNA upstream 24469 612850 ~ 613064 (-) True G206847
TU234743 lncRNA upstream 45632 634013 ~ 634271 (-) True G206851
TU234744 lncRNA upstream 53102 641483 ~ 641749 (-) True G206852
TU234745 lncRNA upstream 53536 641917 ~ 642162 (-) True G206853
TU234746 lncRNA upstream 53968 642349 ~ 642548 (-) True G206854
CI01000049_00400682_00411259.mRNA mRNA downstream 176881 400667 ~ 411259 (-) True CI01000049_00400682_00411259
CI01000049_00375347_00377699.mRNA mRNA downstream 210309 375036 ~ 377831 (-) True CI01000049_00375347_00377699
CI01000049_00345414_00349493.mRNA mRNA downstream 238485 345409 ~ 349655 (-) True CI01000049_00345414_00349493
CI01000049_00330959_00338938.mRNA mRNA downstream 246910 330707 ~ 341230 (-) True CI01000049_00330959_00338938
CI01000049_00297474_00300898.mRNA mRNA downstream 287102 297264 ~ 301038 (-) True CI01000049_00297474_00300898
CI01000049_00715243_00718107.mRNA mRNA upstream 126590 714971 ~ 719363 (-) True CI01000049_00715243_00718107
CI01000049_00720262_00721411.mRNA mRNA upstream 131873 720254 ~ 721411 (-) True CI01000049_00720262_00721411
CI01000049_00732479_00766646.mRNA mRNA upstream 144098 732479 ~ 766646 (-) True CI01000049_00732479_00766646
CI01000049_00769434_00772846.mRNA mRNA upstream 180799 769180 ~ 772846 (-) True CI01000049_00769434_00772846
CI01000049_00841319_00845716.mRNA mRNA upstream 251342 839723 ~ 845716 (-) True CI01000049_00841319_00845716
TU234735 other upstream 42762 631143 ~ 631576 (-) True G206849
TU234741 other upstream 44299 632680 ~ 633195 (-) False G206850
TU234739 other upstream 44311 632692 ~ 633195 (-) True G206850
TU234835 other upstream 237478 825859 ~ 827645 (-) True G206938
TU235215 other upstream 1398630 1987011 ~ 1988767 (-) True G207278

Expression Profile