RNA id: TU234598


Basic Information

Item Value
RNA id TU234598
length 226
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G206723
representative True

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 3061979 ~ 3062204 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTGCTTTGACAAAAATCTATGTTATAATATATTCCTTTATTAGAAATATGACAATGTAAATAAAAGCTACTTTACCCATTATAGGATCATTTGTCTCACAGTTATCGTTTTAACATATGTGGTCAGACCACCAGTGAAAATAAACAGGACTTCATTGTCTAGGGAATGTTGTTTGTTATTAGTGGTATTCTACAGGTCGGTCTTCGGCCAGATGGTCAAACAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU234596 lncRNA upstream 1249 3060442 ~ 3060730 (+) True G206721
TU234565 lncRNA upstream 68873 2932480 ~ 2993106 (+) False G206696
TU234564 lncRNA upstream 68873 2936436 ~ 2993106 (+) True G206696
TU234580 lncRNA upstream 70601 2971429 ~ 2991378 (+) True G206707
TU234318 lncRNA upstream 310180 2751548 ~ 2751799 (+) True G206457
TU234522 lncRNA downstream 18776 3080980 ~ 3081443 (+) True G206654
TU234524 lncRNA downstream 22342 3084546 ~ 3086137 (+) True G206656
TU234527 lncRNA downstream 41431 3103635 ~ 3105339 (+) True G206659
TU234526 lncRNA downstream 241596 3303800 ~ 3304088 (+) True G206658
TU234667 lncRNA downstream 251281 3313485 ~ 3313916 (+) True G206787
CI01000049_02997869_03042673.mRNA mRNA upstream 19216 2997591 ~ 3042763 (+) True CI01000049_02997869_03042673
CI01000049_02827101_02828949.mRNA mRNA upstream 232219 2825830 ~ 2829760 (+) True CI01000049_02827101_02828949
CI01000049_02732074_02754633.mRNA mRNA upstream 307227 2731808 ~ 2754752 (+) True CI01000049_02732074_02754633
CI01000049_02593696_02606225.mRNA mRNA upstream 455709 2593507 ~ 2606270 (+) True CI01000049_02593696_02606225
CI01000049_02345009_02446004.mRNA mRNA upstream 615975 2345009 ~ 2446004 (+) True CI01000049_02345009_02446004
CI01000049_03064154_03077534.mRNA mRNA downstream 1950 3064154 ~ 3077997 (+) True CI01000049_03064154_03077534
CI01000049_03121188_03131739.mRNA mRNA downstream 58984 3121188 ~ 3131911 (+) True CI01000049_03121188_03131739
CI01000049_03133436_03158345.mRNA mRNA downstream 71093 3133297 ~ 3158677 (+) True CI01000049_03133436_03158345
CI01000049_03214802_03219475.mRNA mRNA downstream 152320 3214524 ~ 3219586 (+) True CI01000049_03214802_03219475
CI01000049_03247914_03248937.mRNA mRNA downstream 185710 3247914 ~ 3249051 (+) True CI01000049_03247914_03248937
TU234101 other upstream 1218151 1839815 ~ 1843828 (+) True CI01000049_01840330_01843844
TU235889 other downstream 561798 3624002 ~ 3624311 (+) True G207888
TU236101 other downstream 815192 3877396 ~ 3882211 (+) True G208074
TU236272 other downstream 1411321 4473525 ~ 4473602 (+) True G208235
TU237839 other downstream 3815929 6878133 ~ 6882030 (+) True G209660
TU238078 other downstream 4156644 7297053 ~ 7297062 (+) True G209859

Expression Profile