RNA id: TU240425


Basic Information

Item Value
RNA id TU240425
length 214
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G211932
representative True

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 9477988 ~ 9478201 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAAGTAGAGGTTTTAAACTATGTTTAAAGATTGGAACATTAGGTCTTCATTTCTGACTTGCTGTGTTTAAGCATTTGCAAATAAGATGAGAAAGATCCATGATATTGGTATGGGGTAAGCTTATATGAAAAGAAAATTTAAACATTTTAGAAACGTGTTAATTGACTGCATTTTGTGTGAAAACGACATGAATTGTGTTAATGATATGGTCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU240409 lncRNA downstream 45604 9432105 ~ 9432384 (-) True G211916
TU240139 lncRNA downstream 160378 9317375 ~ 9317610 (-) True G211683
TU240120 lncRNA downstream 172403 9305361 ~ 9305585 (-) True G211664
TU240098 lncRNA downstream 201114 9276670 ~ 9276874 (-) True G211642
TU240022 lncRNA downstream 753573 8705008 ~ 8724415 (-) True G211567
TU240434 lncRNA upstream 31471 9509672 ~ 9509946 (-) True G211941
TU240458 lncRNA upstream 147455 9625656 ~ 9625896 (-) True G211964
CI01000049_09458632_09476364.mRNA mRNA downstream 1624 9458632 ~ 9476364 (-) True CI01000049_09458632_09476364
CI01000049_09436515_09437579.mRNA mRNA downstream 40338 9436484 ~ 9437650 (-) True CI01000049_09436515_09437579
CI01000049_09258155_09261544.mRNA mRNA downstream 215857 9257387 ~ 9262131 (-) True CI01000049_09258155_09261544
CI01000049_09118560_09206979.mRNA mRNA downstream 270525 9118219 ~ 9207463 (-) True CI01000049_09118560_09206979
CI01000049_08933235_08933525.mRNA mRNA downstream 544453 8932800 ~ 8933535 (-) True CI01000049_08933235_08933525
CI01000049_09483465_09491174.mRNA mRNA upstream 5132 9483333 ~ 9491945 (-) True CI01000049_09483465_09491174
CI01000049_09561984_09598361.mRNA mRNA upstream 83578 9561779 ~ 9598361 (-) True CI01000049_09561984_09598361
CI01000049_09627488_09629074.mRNA mRNA upstream 149205 9627406 ~ 9629307 (-) True CI01000049_09627488_09629074
CI01000049_09638562_09659340.mRNA mRNA upstream 160331 9638532 ~ 9660433 (-) True CI01000049_09638562_09659340
CI01000049_09661601_09665293.mRNA mRNA upstream 182926 9661127 ~ 9665293 (-) True CI01000049_09661601_09665293
TU239601 other downstream 1001723 8465293 ~ 8476265 (-) True G211175
TU239618 other downstream 1024538 8451142 ~ 8453450 (-) True CI01000049_08452153_08453389
TU239604 other downstream 1418809 8055633 ~ 8059179 (-) False CI01000049_08056071_08059039
TU239603 other downstream 1418809 8055723 ~ 8059179 (-) True CI01000049_08056071_08059039
TU237643 other downstream 3449575 6028089 ~ 6028413 (-) False G209491

Expression Profile