RNA id: CI01000051_00000977_00002147.mRNA


Basic Information

Item Value
RNA id CI01000051_00000977_00002147.mRNA
length 997
RNA type mRNA
GC content 0.39
exon number 3
gene id CI01000051_00000977_00002147
representative True

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 810 ~ 2539 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACATGCATTTTGATTAAAGTGTTATTAATATAATGCATACAAACATATATTTATGTAATGTTAGAGTTATTAGACTTTTTGGATTAGTGAAAGTGCCTTCAGGTACTTGCATCCCGAATGAAATGTGATTCATTACGTTACACTTTATACACTTTATATCTTAGAAACTTGGTAAAAAGAAAATCCCTGGGATTTATTTTCAAACATTCTTCTTCAACTATTCATGATTGGCAGAGCATTCATTTGTTTTGAAGGCCTGATTATCACCATAGTTTTGTTTCCTTTATAAGCCAACTGTAAAATAATAAATAAAATAAAAAAAACAAATCAACTCCCGCAATTGGCCTGACAATCGATCAATCACTTAAGCATTCAATCTATTTATTGTTAAAATGAAAAAACGAGCTTTTCAGCCTCATGTTAATGCAGGCTACATTTCAGAGCCGCCGCTCCCCGGGCCGAGACGCCGCCGCGGAACTGCACTGGGCCGGGCTGCTGAACCCAGGCCCAACTCCGCTAAAGACAGCGATGAGGGGAGAAAACCACCACCGCCTCCGCCGCCCGCTGTTTCTCAGACTCGGGATTCTTTTGACAGCTCTTCTGCTTTTCCCCCTCTGCTCCCCCTTATTTTCTCTCTTCCTTTCGCACTTCCAACAGATAAGAATCAAAATAGTGTCACACAATATGGCGGCCGTACGACAAGCATTACAGGGCTACCACCCACAGTCTATGAAATACATAAAACAGTAATAATATTCATAAATATAATTTCAGGGGAAAAAAGGACTAAACATTACGATGACTCAGTTGCAGATGCTAATGAACTTTAAAGACTCTCTAACAATAAGGCGGGGCATCATTTTGACTAGAAATCACTGAATGGTTCCTCTTGTTTACTTTAAATGTACTCATATGAGCCACATTTAAAGTTACTAGAGGAGAAAGGAAAGAGAAAAGTTTTGATGGTAGTTCATGGCAATCAACAGTTCATAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU246631 lncRNA upstream 16065 18604 ~ 19362 (-) True G217399
TU246696 lncRNA upstream 67804 70343 ~ 71520 (-) True G217453
TU246668 lncRNA upstream 71459 73998 ~ 77287 (-) True G217426
TU246644 lncRNA upstream 78249 80788 ~ 97708 (-) False G217410
TU246645 lncRNA upstream 78249 80788 ~ 97708 (-) True G217410
CI01000051_00036318_00057051.mRNA mRNA upstream 33779 36318 ~ 57051 (-) True CI01000051_00036318_00057051
CI01000051_00083434_00086769.mRNA mRNA upstream 80181 82720 ~ 87359 (-) True CI01000051_00083434_00086769
CI01000051_00131867_00138611.mRNA mRNA upstream 128033 130572 ~ 138790 (-) False CI01000051_00131867_00138611
CI01000051_00224709_00227613.mRNA mRNA upstream 221968 224507 ~ 227613 (-) False CI01000051_00224709_00227613
CI01000051_00262483_00263385.mRNA mRNA upstream 259902 262441 ~ 263385 (-) True CI01000051_00262483_00263385
TU246734 other upstream 223252 242582 ~ 243026 (-) True G217491
TU246796 other upstream 279656 282195 ~ 282629 (-) True CI01000051_00278614_00302552
TU246745 other upstream 392692 395231 ~ 395982 (-) False CI01000051_00394082_00407612
TU246751 other upstream 398137 400676 ~ 405795 (-) True CI01000051_00394082_00407612
TU246773 other upstream 559657 567040 ~ 567155 (-) True G217528

Expression Profile