RNA id: CI01000051_07611022_07612093.mRNA



Basic Information


Item Value
RNA id CI01000051_07611022_07612093.mRNA
length 994
RNA type mRNA
GC content 0.45
exon number 2
gene id CI01000051_07611022_07612093
representative True

Chromosome Information


Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7610449 ~ 7612093 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATATATATCTTTATAAAGAGGAAGTGAGCGACAGATATTATTTATATAGAGAAAAATAGATGATTTCCTAAGGTCAGTTCTAACTCCGAAAAGCTGCTGTATGTGTTTGTGTGACTAAAAGGGGAATGGACACTTCATGCTTGGCAAAAGTTCAGGAAACACTGAGTTGCTTCTGTACCGAGCCTCTTAACATTTTTTTTTTAAAAAAAGGTAACGCTCTGCCAAGAGCTGGGAACCCTGCCAAAACACTCCCCAGAACCGAGGAATGGAAACTGAAACACACTCTTTCACTAAAAACAGGAGGGAGGTGACTTTTGGTTTTCCTAGTAACGGCAAGGATAACCTCTAGCTGTCACGTTGCAGCAAGCTGTGTGTTTGGAGTGTGGAGGAACTGGACGGCAGGTCCCAACATCAGGAGCAGAGCCACTCCCCTTTCCTGAGCTGAGCTTGGAGGGGAAACCCACGCTTTAAAAGTTTCATTTCACTTAGAAGAGAGTCTCTCGCTGGACTCACACCCACCAGCCTATTCTTTTCGGACATCTCCAACCTGAAAGTGACCGTGTGCCTCAGGATGGCAAACTCCAAATCTTCTCAGACTACTCGTAACATTGTGATCGCCTGCCTGGCCCTGTGGTCGATCATCTCGATTATTATTATTGTGGTATGGGCCACTTCGCCTGATATGAAAGAAGCCAGTCAGTGTCGCAAGGAGATGCAAACTCTAACGGTGAAGCATGACAAGGAAAAAGTCGTGTGGGTCAAAAACCAAAGAGCCCTCGAGGAGCTGGTGAGACAGGGATGGAGGAACCAGACTACCCTACAGAAGCAAATCGACCAGAACAAGGAGCAAATACAGAATCTGAATTTGTCTTTGAATGACAGGTTGCAAGAAATTACCATTCTGACTGGAAACATCACAATTTTGGAGAGCAAGATTGAGGAATACAAACTCATCGAGGGAAACCTCACTACAGAAATCAGCCTGCAGAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU251136 lncRNA upstream 154912 7455331 ~ 7455537 (+) True G221409
TU251135 lncRNA upstream 158438 7451740 ~ 7452011 (+) True G221408
TU251128 lncRNA upstream 159559 7450479 ~ 7450890 (+) False G221406
TU251053 lncRNA downstream 192258 7804351 ~ 7840774 (+) True G221333
TU251035 lncRNA downstream 207604 7866916 ~ 7867028 (+) True G221315
TU251268 lncRNA downstream 383929 7996022 ~ 7996297 (+) True G221530
TU251276 lncRNA downstream 396822 8008915 ~ 8009351 (+) True G221538
TU251277 lncRNA downstream 404151 8016244 ~ 8016535 (+) True G221539
CI01000051_07542167_07549737.mRNA mRNA upstream 59789 7542167 ~ 7550660 (+) True CI01000051_07542167_07549737
CI01000051_07534938_07540104.mRNA mRNA upstream 70031 7532639 ~ 7540418 (+) True CI01000051_07534938_07540104
CI01000051_07507549_07530087.mRNA mRNA upstream 80362 7507549 ~ 7530087 (+) True CI01000051_07507549_07530087
CI01000051_07470914_07489207.mRNA mRNA upstream 121207 7470914 ~ 7489242 (+) True CI01000051_07470914_07489207
CI01000051_07391277_07399712.mRNA mRNA upstream 210663 7390634 ~ 7399786 (+) True CI01000051_07391277_07399712
CI01000051_07634084_07726089.mRNA mRNA downstream 21786 7633879 ~ 7726109 (+) True CI01000051_07634084_07726089
CI01000051_07806350_07831779.mRNA mRNA downstream 194257 7806350 ~ 7832334 (+) False CI01000051_07806350_07831779
CI01000051_07855788_07865402.mRNA mRNA downstream 243147 7855240 ~ 7865625 (+) True CI01000051_07855788_07865402
CI01000051_07873312_07878328.mRNA mRNA downstream 260984 7873077 ~ 7878627 (+) True CI01000051_07873312_07878328
CI01000051_07913334_07929103.mRNA mRNA downstream 301241 7913334 ~ 7929182 (+) True CI01000051_07913334_07929103
TU251108 other upstream 197442 7409523 ~ 7413007 (+) True G221386
TU251039 other upstream 267903 7342041 ~ 7342546 (+) True G221319
TU250885 other upstream 777381 6825799 ~ 6833068 (+) True G221187
TU249310 other upstream 2558416 5018305 ~ 5052033 (+) False G219803
TU251044 other downstream 493550 8105643 ~ 8128075 (+) True G221324
TU252626 other downstream 730849 8342942 ~ 8343448 (+) True G222727

Expression Profile